Gene Sala_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3155 
Symbolgmk 
ID4082491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3303763 
End bp3304425 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID638011540 
Productguanylate kinase 
Protein accessionYP_618191 
Protein GI103488630 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0194] Guanylate kinase 
TIGRFAM ID[TIGR03263] guanylate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA GCGTCCACCT CAACCGCCGC GGCGTGTTGT TCGTCCTTTC CTCGCCGTCG 
GGCGCGGGCA AGACCACCAT TTCGCGCATG ATGCTGGAGG AGGACAAGGA CATTGCCCTT
TCGGTCTCCG CGACCACGCG ACCGCCGCGG CCGGGCGAGA TCGATGGCGT CCATTATCAT
TTCGTCGACA CCGACACCTT CAAGAAAATG GCCGCCGACG GGGCCTTCCT CGAATGGGCG
CATGTGTTCG GCCACCGCTA CGGCACGCCG CGCGCGCCGG TTGAGGAATT GCTCGCCGCG
GGCAAGGACG TGCTGTTCGA CATCGACTGG CAGGGCGCAC AGCAACTCTA TCAGGAGGCC
GGGCCCGACG TCGTGCGCGT TTTCGTGCTG CCGCCGACGA TGGAGGAACT CGAACGCCGC
CTGCGCGCGC GGGGGACCGA CAGCGACGAG GTGATCGCCG CGCGCATGGC GCGCGCCGCG
AACGAGATCA GCCACTGGGA CGGTTATGAC TATGTGCTGA TCAACGACCA TGTCGGCGAA
TGTTATGGCG AGGTGATGGC GATCCTGCGC GCCGAACGGC TGAAGCGCCG CCGCCAGATC
GGGCTGATCG GTTTCGCGCG CGACCTGATC CGATCGGTGC CTGATGCGGA CACGAAGCTT
TGA
 
Protein sequence
MADSVHLNRR GVLFVLSSPS GAGKTTISRM MLEEDKDIAL SVSATTRPPR PGEIDGVHYH 
FVDTDTFKKM AADGAFLEWA HVFGHRYGTP RAPVEELLAA GKDVLFDIDW QGAQQLYQEA
GPDVVRVFVL PPTMEELERR LRARGTDSDE VIAARMARAA NEISHWDGYD YVLINDHVGE
CYGEVMAILR AERLKRRRQI GLIGFARDLI RSVPDADTKL