Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3155 |
Symbol | gmk |
ID | 4082491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3303763 |
End bp | 3304425 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638011540 |
Product | guanylate kinase |
Protein accession | YP_618191 |
Protein GI | 103488630 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0194] Guanylate kinase |
TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA GCGTCCACCT CAACCGCCGC GGCGTGTTGT TCGTCCTTTC CTCGCCGTCG GGCGCGGGCA AGACCACCAT TTCGCGCATG ATGCTGGAGG AGGACAAGGA CATTGCCCTT TCGGTCTCCG CGACCACGCG ACCGCCGCGG CCGGGCGAGA TCGATGGCGT CCATTATCAT TTCGTCGACA CCGACACCTT CAAGAAAATG GCCGCCGACG GGGCCTTCCT CGAATGGGCG CATGTGTTCG GCCACCGCTA CGGCACGCCG CGCGCGCCGG TTGAGGAATT GCTCGCCGCG GGCAAGGACG TGCTGTTCGA CATCGACTGG CAGGGCGCAC AGCAACTCTA TCAGGAGGCC GGGCCCGACG TCGTGCGCGT TTTCGTGCTG CCGCCGACGA TGGAGGAACT CGAACGCCGC CTGCGCGCGC GGGGGACCGA CAGCGACGAG GTGATCGCCG CGCGCATGGC GCGCGCCGCG AACGAGATCA GCCACTGGGA CGGTTATGAC TATGTGCTGA TCAACGACCA TGTCGGCGAA TGTTATGGCG AGGTGATGGC GATCCTGCGC GCCGAACGGC TGAAGCGCCG CCGCCAGATC GGGCTGATCG GTTTCGCGCG CGACCTGATC CGATCGGTGC CTGATGCGGA CACGAAGCTT TGA
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Protein sequence | MADSVHLNRR GVLFVLSSPS GAGKTTISRM MLEEDKDIAL SVSATTRPPR PGEIDGVHYH FVDTDTFKKM AADGAFLEWA HVFGHRYGTP RAPVEELLAA GKDVLFDIDW QGAQQLYQEA GPDVVRVFVL PPTMEELERR LRARGTDSDE VIAARMARAA NEISHWDGYD YVLINDHVGE CYGEVMAILR AERLKRRRQI GLIGFARDLI RSVPDADTKL
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