Gene Sala_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3143 
Symbol 
ID4082399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3294749 
End bp3295516 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID638011528 
Producthypothetical protein 
Protein accessionYP_618179 
Protein GI103488618 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC CCGCCGCCAT CGACCTCGCC GCGCTGCTTC CCTTCATTCT GATCGGCTTT 
GCCGCGCAGC TCGTTGACGG CGCGCTCGGC ATGGCGTTTG GCGTCATCTG CAACACCTTG
CTCGTCGCGG TGCTTGGCGT TCCGCCCGCG ACCGCCTCGG CGCGCATCCA TGTCGTCGAG
ATTTTCACCA CCGGCGCGTC CGGGCTCAGC CATTTGTTCC ATCGCAACAT CGACTGGCCG
CTCTTTCTCC GCCTGCTCAT CCCCGGCGTG ATCGGCGGCG TCGCGGGCGC CTATGTGCTC
ACATCGCTCC ACGCCGAGGT GGTGAAGCCT TTCGTGCTGG GCTATCTGGT GCTGATCGGT
ATCTGGCTGC TGGTGCGCGG CCTCCTGTAT CCGCCGAAGA TCGCGAGGCC GAAAGTCGTC
GCGCCGCTCG CGGCCGTCGG CGGTTTTCTC GATGCCGCGG GCGGCGGGGG CTGGGGACCG
GTCGTGACCT CGAACCTGCT TGTGCAGGGC GGCGAGCCGC GCAAGATCGT CGGTACGGTG
AACAGCGTCG AGTTCTTCCT CGCGGTTGCG GTCTCGCTCG CCTTCATCTG GCAGCTCGGC
CTCGACGATA TCCTCGGCCC GACGCTGGGC CTGATCATCG GCGGTGTCGT TGCGGCGCCG
ATCGGCGCGA TGATGGCCAA GCGTTTTTCG CCCAAGCTGA TGCTGGTGAT GGTCGGCACC
GTGCTGACCG CGACCAGCGC GTTCGGGCTG TACCGGGCGC TGGCTTGA
 
Protein sequence
MIDPAAIDLA ALLPFILIGF AAQLVDGALG MAFGVICNTL LVAVLGVPPA TASARIHVVE 
IFTTGASGLS HLFHRNIDWP LFLRLLIPGV IGGVAGAYVL TSLHAEVVKP FVLGYLVLIG
IWLLVRGLLY PPKIARPKVV APLAAVGGFL DAAGGGGWGP VVTSNLLVQG GEPRKIVGTV
NSVEFFLAVA VSLAFIWQLG LDDILGPTLG LIIGGVVAAP IGAMMAKRFS PKLMLVMVGT
VLTATSAFGL YRALA