Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3140 |
Symbol | trmB |
ID | 4082396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3292374 |
End bp | 3293153 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638011525 |
Product | tRNA (guanine-N(7)-)-methyltransferase |
Protein accession | YP_618176 |
Protein GI | 103488615 |
COG category | [R] General function prediction only |
COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCCGCC CCGCCACGGA CCCACTGCGC TTGCCGCCCC CGCTTGCCCG CGCTAACGCG CGCGCCATGA CTGCGCACAA ACCCGGCGAT CCGACGACCC TCAACCGCCT TTACGGCCGA TCGAAGGGCA AGCCGCTGCG CGCCGGCCAG CAGGATCTGG TCGATACGCT GTTGCCACAG ATCGCGGTGC CGCTGGACGG CGAGGTCACC GCGCGGCGGT TGTTCGGCTT CGACCGCCCG CTGCATTTCG AAATCGGCTT TGGCGGCGGC GAGCATATGG CGGCGCGCGC CGACATGCTG CCCGACCATG GTTTCATCGG CGCCGAACCC TTTATCAACG GCGTTGCGCA GGCGCTCGTC CATGTCGCGG GCGATCATGG CCAGCACCCG CCGCTCGGCA ATGTCCGCAT CCACCATGGC GACGCGCTGG AGGTGCTGCG GCGCATCCCC GACGGCGCCC TCGCCTTCGT CTATCTGCTG CACCCCGACC CCTGGCCCAA GGCGCGCCAT GCCAAGCGGC GGATGATGAA CGACGGTCCG CTCGACCTGA TCGCCGCGAA GCTCAAACCC GGCGGCGAGT TCCGTTTCGG CACCGACCAC CCCATTTACC TCCGGCACGC GCTGATGGTG ATGCGCCGTC ATCGGCATCA GTTCGAATGG CTGGCAAAGG ATGCGCGCGA TTTTCAGGTG CGGCCCGGCG GCTGGCCCGA AACGCGCTAC GAAGCCAAGG CGCGCGCACA GGGGCACGAA GTCTGGTATT TCCGCTGGCG GCGTCGCTGA
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Protein sequence | MSRPATDPLR LPPPLARANA RAMTAHKPGD PTTLNRLYGR SKGKPLRAGQ QDLVDTLLPQ IAVPLDGEVT ARRLFGFDRP LHFEIGFGGG EHMAARADML PDHGFIGAEP FINGVAQALV HVAGDHGQHP PLGNVRIHHG DALEVLRRIP DGALAFVYLL HPDPWPKARH AKRRMMNDGP LDLIAAKLKP GGEFRFGTDH PIYLRHALMV MRRHRHQFEW LAKDARDFQV RPGGWPETRY EAKARAQGHE VWYFRWRRR
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