Gene Sala_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3140 
SymboltrmB 
ID4082396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3292374 
End bp3293153 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content68% 
IMG OID638011525 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_618176 
Protein GI103488615 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCGCC CCGCCACGGA CCCACTGCGC TTGCCGCCCC CGCTTGCCCG CGCTAACGCG 
CGCGCCATGA CTGCGCACAA ACCCGGCGAT CCGACGACCC TCAACCGCCT TTACGGCCGA
TCGAAGGGCA AGCCGCTGCG CGCCGGCCAG CAGGATCTGG TCGATACGCT GTTGCCACAG
ATCGCGGTGC CGCTGGACGG CGAGGTCACC GCGCGGCGGT TGTTCGGCTT CGACCGCCCG
CTGCATTTCG AAATCGGCTT TGGCGGCGGC GAGCATATGG CGGCGCGCGC CGACATGCTG
CCCGACCATG GTTTCATCGG CGCCGAACCC TTTATCAACG GCGTTGCGCA GGCGCTCGTC
CATGTCGCGG GCGATCATGG CCAGCACCCG CCGCTCGGCA ATGTCCGCAT CCACCATGGC
GACGCGCTGG AGGTGCTGCG GCGCATCCCC GACGGCGCCC TCGCCTTCGT CTATCTGCTG
CACCCCGACC CCTGGCCCAA GGCGCGCCAT GCCAAGCGGC GGATGATGAA CGACGGTCCG
CTCGACCTGA TCGCCGCGAA GCTCAAACCC GGCGGCGAGT TCCGTTTCGG CACCGACCAC
CCCATTTACC TCCGGCACGC GCTGATGGTG ATGCGCCGTC ATCGGCATCA GTTCGAATGG
CTGGCAAAGG ATGCGCGCGA TTTTCAGGTG CGGCCCGGCG GCTGGCCCGA AACGCGCTAC
GAAGCCAAGG CGCGCGCACA GGGGCACGAA GTCTGGTATT TCCGCTGGCG GCGTCGCTGA
 
Protein sequence
MSRPATDPLR LPPPLARANA RAMTAHKPGD PTTLNRLYGR SKGKPLRAGQ QDLVDTLLPQ 
IAVPLDGEVT ARRLFGFDRP LHFEIGFGGG EHMAARADML PDHGFIGAEP FINGVAQALV
HVAGDHGQHP PLGNVRIHHG DALEVLRRIP DGALAFVYLL HPDPWPKARH AKRRMMNDGP
LDLIAAKLKP GGEFRFGTDH PIYLRHALMV MRRHRHQFEW LAKDARDFQV RPGGWPETRY
EAKARAQGHE VWYFRWRRR