| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3134 |
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| Symbol | |
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| ID | 4082390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3285510 |
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| End bp | 3286988 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011519 |
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| Product | amine oxidase |
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| Protein accession | YP_618170 |
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| Protein GI | 103488609 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.954476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.604257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA CCGCCATCGT CATCGGCGCC GGTTTCGGCG GCCTCGCGCT TGCGATCCGG
CTGCAATCGG CAGGGGTCGC GACGACGATC GTCGAGGCGC GCGACAAGCC CGGCGGGCGC
GCCTATCATT GGGTGCGCGA CGGCTTCACC TTCGACGCCG GGCCGACCGT CATCACCGAT
CCGCCCTGCC TCAGCGACCT GTGGGAATTG AGCGGGCAGG ACATGGCCGC CGACGTCGAA
CTGATGCCCG TCAGTCCTTT CTACCGGCTC AACTGGCCCG ACGGGACCAA TTTCGACTAT
TCGAACGACG AGGCGGCGCT CCACGCCGAG ATCGCGCGGC TGAACCCCGC CGACGTCGCG
GGTTACGAAC GCTTCCTCGA CTATTCGAAG GGCGTTTACG AACAGGGCTA TGTCAAGCTC
GGCGCGACCG CCTTTCTCGA CTTTCGGGCG ATGATCAGGG CCGCGCCTGC GCTGATGAAA
TATCAGGCGT GGCGCAGCGT CTATTCGATC GTCTCCTCCT ATGTGCAGGA TGAGCGGCTG
CGGCAGGCGC TGTCGTTCCA CACCCTGCTC GTTGGCGGCA ATCCGATGAC GACGAGCGCC
ATCTATGCGC TGATCCACAC GATCGAGAAG GACGGCGGCG TCTGGTTCGC GCGCGGCGGC
ACCAACCGGC TGGTCGCCGC ACTGATCCGC CTGTTCGAGC GGCTGGGCGG GACGCTGCGC
CTCGGCGATG CGGTGACGGC GATTCACACC GCGGGCGACC GCGCGACCGG GGTGACCACC
GCGAGCGGCT GGCGCGGCGA CGCCGAAATG ATCGCGTGCA ACGGCGACCT GATGCACGCC
TACCGCGACC TGCTCGCCGA TCATCCGCGC GGGCCGAAAA CGGCGCGCAG CCTGGCGCGC
AAACGCTGGT CGCCGTCGCT GTTCGTCGTG CATTTCGGCG CGAAGGGCGA CTATCCCGGT
GTCGCGCACC ACAGCATCTT GTTCGGCCCG CGGTATAAAG GGCTGCTCGA CGACATCTAC
AAGAACGGCG TCGTGCCGGA CGATTTCTCG CTCTACCTCC ACCATCCCAG CATCACCGAT
CCGGGCATGG CGCCGCCGGG GCATTCGACC TTTTACGCGC TTGCCCCCGT CGCGCACCTC
GGCAAGGCGA AAGCCGACTG GGACGGCGAT TTCGGCACGC GCTTCGCCGA TGCGATCATC
GACGAGGTCG AACGGCGCGT CGCACCCGAT CTTCGCGCCA ATATCGTCAC GCGCTTTCAC
TATACGCCGA CCGATTTCGG TCGCGACCTC AATGCGCACC TCGGCAGCGC GTTCAGCCTC
GAACCCGTGC TGTGGCAGTC GGCCTTTTTC CGCGCGCACA ACCGCGACGA CAGGATTTCC
AATCTTTACT TCGTCGGCGC GGGAACGCAT CCGGGCGCGG GAATCCCAGG CGTCGTCGGC
AGCGCCAAGG CAACGGCGGC GTTGATGCTG GACTTGTAA
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| Protein sequence | MTRTAIVIGA GFGGLALAIR LQSAGVATTI VEARDKPGGR AYHWVRDGFT FDAGPTVITD
PPCLSDLWEL SGQDMAADVE LMPVSPFYRL NWPDGTNFDY SNDEAALHAE IARLNPADVA
GYERFLDYSK GVYEQGYVKL GATAFLDFRA MIRAAPALMK YQAWRSVYSI VSSYVQDERL
RQALSFHTLL VGGNPMTTSA IYALIHTIEK DGGVWFARGG TNRLVAALIR LFERLGGTLR
LGDAVTAIHT AGDRATGVTT ASGWRGDAEM IACNGDLMHA YRDLLADHPR GPKTARSLAR
KRWSPSLFVV HFGAKGDYPG VAHHSILFGP RYKGLLDDIY KNGVVPDDFS LYLHHPSITD
PGMAPPGHST FYALAPVAHL GKAKADWDGD FGTRFADAII DEVERRVAPD LRANIVTRFH
YTPTDFGRDL NAHLGSAFSL EPVLWQSAFF RAHNRDDRIS NLYFVGAGTH PGAGIPGVVG
SAKATAALML DL
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