| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3120 |
|---|
| Symbol | |
|---|
| ID | 4082706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3270789 |
|---|
| End bp | 3271334 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638011505 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_618156 |
|---|
| Protein GI | 103488595 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC CGATCAAACT GGGGGGCGTC CACCACGCCG CCTATCGCTG CAAGGATGCG
AAGGAGACGG TCGAATGGTA CGAGGCCATG CTCGGCATGA CCTATACCAC CGCCTTTGCC
GAGGATCATG TGCCGTCGAC CGGCGAATAT GACCCGTATA TGCACGTCTT CCTCGACGCC
GGGAATGGCA ACATCCTCGC CTTTTTCGAG TTGCCGAACC AGCCCGACAT GGGCCGCGAC
GAAAATACGC CAAAATGGGT CCAGCATCTG GCGTTCAGGG TCGGCAGCTA TGACGAGCTG
ATCGCGGCGA AGGCGCATCT GGAGGCCAAT GGCGTCGAGG TGCTCGGCCC GACGCACCAC
GGCATCTTCA AGTCGATCTA TTTCTTCGAC CCCAACGGCC ACCGCATCGA ACTCGCCTGT
GACATCGGCA CCGACGAACA ATATGCCGAA CTGCGACGCG TCGCGCCGCT GATGCTCGAG
GAATGGAGCC GGACCAAGAA AGCGCCGCGC CACGCCGACT GGCTGCACGC GGCGGCGAAC
GAGTAG
|
|---|
| Protein sequence | MTSPIKLGGV HHAAYRCKDA KETVEWYEAM LGMTYTTAFA EDHVPSTGEY DPYMHVFLDA
GNGNILAFFE LPNQPDMGRD ENTPKWVQHL AFRVGSYDEL IAAKAHLEAN GVEVLGPTHH
GIFKSIYFFD PNGHRIELAC DIGTDEQYAE LRRVAPLMLE EWSRTKKAPR HADWLHAAAN
E
|
|---|
| |