| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3119 |
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| Symbol | |
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| ID | 4082705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3269701 |
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| End bp | 3270792 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638011504 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_618155 |
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| Protein GI | 103488594 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACC TGTTCGAAAA CCCGCTGGGC CTCGACGGCT TCGAGTTCGT CGAGTTTTCG
GCGCCCGAAA AGGGCATTCT CGAGCCTGTG TTCGAACGCA TGGGCTTTAC CCGGATCGCG
CGCCACCGGT CGAAAGACGT GCAATTGTGG CGTCAGGGCG ACATCAATCT GATCGCCAAT
TACGAACCCC GCTCTCCCGC TGCCTATTTC GCCGCCGAAC ATGGCCCGTC GGCGTGCGGC
ATGGGGTGGC GCTGCCGCGA TGCGGCCAAA GCCTATGCGG AAGCGATCGA GCGCGGCGCC
GAGCCGGTCG AAACGACTCC CGGCCCGATG GAACTGCGCC TGCCCGCGAT CCGCGGCATC
GGCGGCTCGA TTATCTATCT GATCGACCGC TATGGCGACG ATCTCAGCAT CTACGACATC
GACTTCGTTT ACGAGGAGGG CGTCGACCGC CATCCGGTCG GCGCGGGGCT GAAGGTCATC
GATCACCTGA CGCACAATGT CTATGGCGGC CGCATGGCGC ATTGGGCGGC GTTCTACGAG
CGCATCGCGG GTTTTCGCGA AATCCGCTAT TTCGACATCA AGGGTGAATA TACCGGCCTC
ACGTCAAAGG CGATGACCGC GCCCGACGGC AAGATACGCA TTCCGCTGAA CGAGGAGGGC
GCCGGCGGCG GCGGCCAGAT CGAGGAATAT CTGCGCGCCT ACAATGGCGA GGGTATCCAG
CATATCGCCT TTGCCTGCGA CGACCTCTAC GCCGCGTGGG ACAGGCTGAA AGCGCTCGGC
AACCCCTTCG CGCCATCGCC GCCCGACACC TATTATGAAA TGCTCGCCGA GCGCCTGCCC
GGCCATGGCG AGCCGGTCGA GGAACTGAAA TCGCGCGGCA TATTGCTCGA CGGTTCGACG
ACCGAGGGCG ATCCGCGCCT GCTGCTCCAG ATTTTCGGGC AGACGGTGAT CGGCCCGGTT
TTCTTCGAGT TCATCCAGCG CAAGAAGGAC GAAGGCTTCG GCGAGGGCAA TTTCACCGCG
CTGTTCAAGT CGATGGAACT CGACCAGATC CGCCGCGGCG CGCTCAACGT CGAAGCGGAG
CCCGCCGAAT GA
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| Protein sequence | MADLFENPLG LDGFEFVEFS APEKGILEPV FERMGFTRIA RHRSKDVQLW RQGDINLIAN
YEPRSPAAYF AAEHGPSACG MGWRCRDAAK AYAEAIERGA EPVETTPGPM ELRLPAIRGI
GGSIIYLIDR YGDDLSIYDI DFVYEEGVDR HPVGAGLKVI DHLTHNVYGG RMAHWAAFYE
RIAGFREIRY FDIKGEYTGL TSKAMTAPDG KIRIPLNEEG AGGGGQIEEY LRAYNGEGIQ
HIAFACDDLY AAWDRLKALG NPFAPSPPDT YYEMLAERLP GHGEPVEELK SRGILLDGST
TEGDPRLLLQ IFGQTVIGPV FFEFIQRKKD EGFGEGNFTA LFKSMELDQI RRGALNVEAE
PAE
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