Gene Sala_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3106 
Symbol 
ID4082693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3254834 
End bp3255046 
Gene Length213 bp 
Protein Length70 aa 
Translation table11 
GC content69% 
IMG OID638011492 
Producthypothetical protein 
Protein accessionYP_618143 
Protein GI103488582 
COG category[S] Function unknown 
COG ID[COG3908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.473325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATCG CCAGCCGTAA CCGCCTTGCC CGCCTCCACT ATGGGCCGAA CGGCTTTCGC 
GTGCTGGCGC CCGGCGACCA TGTGCTGTGC GCGGTGACCG GCGTGCCGAT CGGGCTCGAC
GAGCTTCGCT ACTGGTCGGT GGCGCGGCAG GAAGCCTATG CGAGCGCGGC GATATCGGTG
CAGGCGGAAC TGGACGCCGC GCGCACGGCA TGA
 
Protein sequence
MLIASRNRLA RLHYGPNGFR VLAPGDHVLC AVTGVPIGLD ELRYWSVARQ EAYASAAISV 
QAELDAARTA