Gene Sala_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3100 
Symbol 
ID4082836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3248841 
End bp3249092 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content66% 
IMG OID638011486 
Producthypothetical protein 
Protein accessionYP_618137 
Protein GI103488576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.466356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCACC GTGATTGCCC CCTGAAGTTC GTCGGCAAGA AGCGTCTCGC AGGACGGGCT 
GGTTGCCCGG ACCAGAGACG CGCCGCTGTC CGGCGGGCTT CAGGGGGCAA CCCCTCCAGG
GCGGGTCGAT TTTGGCCGAT TGCCACGTTG CTCGTCGGGC GCGATGTCCC GCATCGCGCC
GCTCCTCGCG CCTCGCACTC GGCCAAAATC GCCTCCGTCA CGGTGGGTCA ATATCATGTC
ATCGCGCTCT AA
 
Protein sequence
MTHRDCPLKF VGKKRLAGRA GCPDQRRAAV RRASGGNPSR AGRFWPIATL LVGRDVPHRA 
APRASHSAKI ASVTVGQYHV IAL