Gene Sala_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3097 
Symbol 
ID4082833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3246516 
End bp3247424 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content71% 
IMG OID638011483 
Productmethylenetetrahydrofolate dehydrogenase (NADP+) 
Protein accessionYP_618134 
Protein GI103488573 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTC CTGTTCCCGA CGCCAGAGTG ATCGATGGCA AGGCCTTTGC CGCGGGGCTG 
CGCGCGCGGA TCGCCGACGC GGTTCCCGCC TTCCGCGCGG CGACGGGCCG CGCGCCGGGG
CTTGCCGTCG TGCTGGTCGG CGACGATCCG GCGAGCGCGG TCTATGTCGG GTCAAAGGGC
AAGGCGACCG TCGCGGCGGG CATGGCAAGC TTCGAGCACC GCCTGGCTGC GACGGCGACG
CAGGATGAGG TCGAGGCGCT GCTTCGCCAG CTCAACGCCG ACGAGGCGGT CGACGGCATC
CTGCTGCAAT TGCCGCTTCC CGGCCATCTC GACGAACAGG CGGCGGTCGC GACGATCGAC
CCCGACAAGG ATGTCGACGG GCTGACCCCG GTCAGCGCGG GCCGCCTTGC GCTCGGCATT
CCCGGCATGG TGCCCTGCAC TCCCTATGGC TGCCTGCTGC TTCTCCAGGA CCGGCTCGGC
GATTTGTCGG GCAAGGATGC GATCGTCATC GGCCGCTCGA TTCTGGTCGG CAAGCCGATG
GGCCAATTGC TGCTCGGCGC CAACTGCACG GTGACGATGG CGCACAGCCG GACCAAAGAC
CTGCCCGCGC TTGTGCGGCG CGCCGACATC GTCGTCGCCG CGGTCGGCCG CGCCGAGATG
GTGAAGGGCG ACTGGATCAA GCCCGGCGCG ATCGTCATCG ACGTCGGCAT CAACCGCCTC
CCGCCTGCGG ACGGCGCGGC AAAGGGGCGA CTGGTGGGCG ATGTCGATTA TGCCGCGGCG
CTCGGCGTCG CCGATGCGAT CACACCGGTG CCGGGCGGGG TCGGGCCGAT GACCATTGCC
TGCCTGCTCC GCAACACGCT CGTCGCCGCG CACCGCCGGG CGGGGCTGGC CGATCCGGAA
GGGTTCTGA
 
Protein sequence
MTGPVPDARV IDGKAFAAGL RARIADAVPA FRAATGRAPG LAVVLVGDDP ASAVYVGSKG 
KATVAAGMAS FEHRLAATAT QDEVEALLRQ LNADEAVDGI LLQLPLPGHL DEQAAVATID
PDKDVDGLTP VSAGRLALGI PGMVPCTPYG CLLLLQDRLG DLSGKDAIVI GRSILVGKPM
GQLLLGANCT VTMAHSRTKD LPALVRRADI VVAAVGRAEM VKGDWIKPGA IVIDVGINRL
PPADGAAKGR LVGDVDYAAA LGVADAITPV PGGVGPMTIA CLLRNTLVAA HRRAGLADPE
GF