Gene Sala_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3094 
Symbol 
ID4082830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3244486 
End bp3245262 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content65% 
IMG OID638011480 
Producthypothetical protein 
Protein accessionYP_618131 
Protein GI103488570 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT CTAGCGGGCT TTGGCGACAG GGCAAGGGGC GCGCGCCGCC GCATCTTTCC 
CGGTCTTTCC AGCGTGCAAA AAAGCGACTA TCGGGCGGCA TGACCGAACC GACCTCGACG
GCGCTGCCGC GCACGCTCTC GCCCTCGCTC TTCCTTTTCT CGATCGTCTA TGGCGGCATG
GTCGTGCTCG CGGGGGTGCT CGGCAACAAG CAGGTCGCGC TCGGCGACTG GCTGGCGGTC
GAGGCGGGGA TTTTCGCGTT TCTGATGCTT GTCGCCTTGT CGAGCGCGGT GTCGGAGCTG
CACGGCCAGA CGGTCGCCAA TCGCATCGTC CTGTGGGGGT TTGTGCCCCT CGTGCTGTCG
ATCATGCTCA CCGCGCTGGT CCTCGCGCTT CCCGCCTCAC CCGAAATGCA GCCCGAACGG
CTCGCGGCCT TTGACATGAT CCTTGGGCAA AGCCCGCGCC TGATGGCCGC CGGGATCGTT
GCGTACGGCA CGTCGCAGTT CCTTAACGTC ACCATCTTTT CCAGGCTGCG CGGGCGCGAG
AGCGCCGGTA CCGGGACGAC CTGGCTCGCG ATCCGCGGCG CGATCGCCAG CGCCTTGAGC
CAGATCGTCG ATACTTTGCT GTTCGTGACG ATCGCCTTTT ACGGCGTGTT CCCGATCGCC
AATCTGATGG GCGGACAGAT GCTCGCCAAG GTCGTGCTGT CGGTGCTCGT CATTCCCTTC
GTCATCACCG GGCTGGTCGC GCTGGGCCGC AGCCTCGATG CGAAAAACGC CGGATGA
 
Protein sequence
MRLSSGLWRQ GKGRAPPHLS RSFQRAKKRL SGGMTEPTST ALPRTLSPSL FLFSIVYGGM 
VVLAGVLGNK QVALGDWLAV EAGIFAFLML VALSSAVSEL HGQTVANRIV LWGFVPLVLS
IMLTALVLAL PASPEMQPER LAAFDMILGQ SPRLMAAGIV AYGTSQFLNV TIFSRLRGRE
SAGTGTTWLA IRGAIASALS QIVDTLLFVT IAFYGVFPIA NLMGGQMLAK VVLSVLVIPF
VITGLVALGR SLDAKNAG