Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3083 |
Symbol | |
ID | 4083091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 3235551 |
End bp | 3236117 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638011469 |
Product | HNH endonuclease |
Protein accession | YP_618120 |
Protein GI | 103488559 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.342454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCATC CCGATCTTGC CCGGCATCCC GATAGCTGTC CGGCGCTCGT TCTCAACGCC GACTATACGC CGCTGAGCTA TTATCCCTTG AGCCTCTGGC CCTGGCAGAC CGCGGTGAAG GCGGTTTTCC TCGACCGCGT CACCATCGTC GAGAATTACG AGCGCGAGAT TCATTCGCCG ACGCGGACGA TGCCGATCCC CAGCGTCATT GCGCTGCGCC AATATGTGAA GCCGTCGGAG CATCCCGCCT TCACGCGGTT CAACCTGTTC CTGCGCGACC GTTTTGCGTG CCAGTATTGC GGGTCGGGCA AGGATCTGAC CTTCGATCAT GTCGTGCCGC GGCGATTGGG CGGGCGCACG ACGTGGGAGA ATGTCACGAC CGCCTGCGCC CCGTGCAACC TGAAGAAGGG TGGCCGAACG CCACAACAGG CGCATATGCC GCTCCATCGC CAGCCGTGGC GCCCGACGAG CTGGCAGCTG CAGGACAATG GCCGGGCGTT CCCGCCCAAC TATCTGCACA CGAGCTGGAT CGACTGGCTG TACTGGGATG TTGAACTCGA AGGCTGA
|
Protein sequence | MFHPDLARHP DSCPALVLNA DYTPLSYYPL SLWPWQTAVK AVFLDRVTIV ENYEREIHSP TRTMPIPSVI ALRQYVKPSE HPAFTRFNLF LRDRFACQYC GSGKDLTFDH VVPRRLGGRT TWENVTTACA PCNLKKGGRT PQQAHMPLHR QPWRPTSWQL QDNGRAFPPN YLHTSWIDWL YWDVELEG
|
| |