Gene Sala_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3083 
Symbol 
ID4083091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3235551 
End bp3236117 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content63% 
IMG OID638011469 
ProductHNH endonuclease 
Protein accessionYP_618120 
Protein GI103488559 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.342454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCATC CCGATCTTGC CCGGCATCCC GATAGCTGTC CGGCGCTCGT TCTCAACGCC 
GACTATACGC CGCTGAGCTA TTATCCCTTG AGCCTCTGGC CCTGGCAGAC CGCGGTGAAG
GCGGTTTTCC TCGACCGCGT CACCATCGTC GAGAATTACG AGCGCGAGAT TCATTCGCCG
ACGCGGACGA TGCCGATCCC CAGCGTCATT GCGCTGCGCC AATATGTGAA GCCGTCGGAG
CATCCCGCCT TCACGCGGTT CAACCTGTTC CTGCGCGACC GTTTTGCGTG CCAGTATTGC
GGGTCGGGCA AGGATCTGAC CTTCGATCAT GTCGTGCCGC GGCGATTGGG CGGGCGCACG
ACGTGGGAGA ATGTCACGAC CGCCTGCGCC CCGTGCAACC TGAAGAAGGG TGGCCGAACG
CCACAACAGG CGCATATGCC GCTCCATCGC CAGCCGTGGC GCCCGACGAG CTGGCAGCTG
CAGGACAATG GCCGGGCGTT CCCGCCCAAC TATCTGCACA CGAGCTGGAT CGACTGGCTG
TACTGGGATG TTGAACTCGA AGGCTGA
 
Protein sequence
MFHPDLARHP DSCPALVLNA DYTPLSYYPL SLWPWQTAVK AVFLDRVTIV ENYEREIHSP 
TRTMPIPSVI ALRQYVKPSE HPAFTRFNLF LRDRFACQYC GSGKDLTFDH VVPRRLGGRT
TWENVTTACA PCNLKKGGRT PQQAHMPLHR QPWRPTSWQL QDNGRAFPPN YLHTSWIDWL
YWDVELEG