Gene Sala_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3082 
Symbol 
ID4083090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3235044 
End bp3235469 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content67% 
IMG OID638011468 
Productlipoprotein-related protein 
Protein accessionYP_618119 
Protein GI103488558 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.185373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCGCG TCACCCGAAT GCTCGCCGTC GGCATGGTCG CCGCCCCGCT GCTCGCCGCC 
TGCGCGACAA TCCCGCCCGC CGAGCAGCCC GTGACCGTCA CCGGGAGCAT CACCTATCGC
GAGCGCATCG CGTTGCCGCC GACGGCGCGG GTCGAAATCG CCCTTGCCGA CGTCAGCCTG
GCCGATGCGC CATCGACGAC GGTCGCTCGG CAATCCTTCA CCGCCGACGG CCGGCAGGTG
CCCTTTGCCT TTTCGCTGAC GGTCGATCAG CGCCAGCTCG ACCCGCGCCA CAGTTACGCC
GTGTCGGCGC GCATCAGCGA CGCGTCGGGG CGACTGATGT TCATCACCGA CACGCGCAAC
AATGTTCCGT TCGATGGCCG CCGCGTGATC GATATGGGCA TGTTGATGCT GGTCAAAACG
CATTGA
 
Protein sequence
MVRVTRMLAV GMVAAPLLAA CATIPPAEQP VTVTGSITYR ERIALPPTAR VEIALADVSL 
ADAPSTTVAR QSFTADGRQV PFAFSLTVDQ RQLDPRHSYA VSARISDASG RLMFITDTRN
NVPFDGRRVI DMGMLMLVKT H