| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3079 |
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| Symbol | |
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| ID | 4083087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3230783 |
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| End bp | 3231586 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011465 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_618116 |
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| Protein GI | 103488555 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.223679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA CTGACATGTT CGGCCTCGAC GGCCGCATCG CCCTCGTCAC CGGCGGCTCG
CGCGGCATCG GCAAGATGAT CGTCGAGGGC TATCTCGCCG CGGGCGCCGC GCGCGTTTAT
ATCTCGGCGC GCAAGACCGC GCAGATTGAG GAAGCCGTCG CCGATTTCGA AACGCGCTAT
CCGGGCAAGG TCATCGGCCT ACCCGTAGAC CTCTCGACGG TCGAGGGCTG CCGCGCGCTC
GCCAGAGAAC TCGAAGCGCG CGAGGAGCGC CTCGACATCC TCGTCAACAA TGCCGGCGCG
GCGTGGGGCG AACCCTTCGA GGGCTTTCCC GAAGCGGGCT GGGACAAGGT GATGGACATC
AACGTCAAAT CGCCCTTCTT CCTGACGCAG GCGCTGCATG GGTTACTCAA GGCTGCGGGC
ACGCACGAAC GCCCCGCCAA GGTCATCAAC ATCGGCTCGA TCGACGGGAT GCGCCTCAAT
CCGTGGGAAA CCTACAGCTA TCATGCGTCG AAAGCCGCAA TCCTCTATCT CACCAAGCGC
CTCGCGGCGC GCCTCGTCAC CGACCATATC CTCGTCACCG CGATTGCGCC GGGCGCCTTC
CAGTCGGACA TGAACAAGGC GGCGCGCGAC CATGGCGACG CGGTCGCGAA GAGCATTCCG
GTGAAACGCA TCGGCGTGCC CGAGGATATG GCCGGCGCTG CGATCTATCT CGCGTCGAAG
GCGGGCGATT ATGTGGTGGG CGACACGATC ACGGTCGACG GCGGGCTGGT CCACGGCGAT
CTGAAGACCA GCATCGACGC CTGA
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| Protein sequence | MNLTDMFGLD GRIALVTGGS RGIGKMIVEG YLAAGAARVY ISARKTAQIE EAVADFETRY
PGKVIGLPVD LSTVEGCRAL ARELEAREER LDILVNNAGA AWGEPFEGFP EAGWDKVMDI
NVKSPFFLTQ ALHGLLKAAG THERPAKVIN IGSIDGMRLN PWETYSYHAS KAAILYLTKR
LAARLVTDHI LVTAIAPGAF QSDMNKAARD HGDAVAKSIP VKRIGVPEDM AGAAIYLASK
AGDYVVGDTI TVDGGLVHGD LKTSIDA
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