Gene Sala_3063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3063 
Symbol 
ID4082912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3214550 
End bp3215020 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID638011449 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_618100 
Protein GI103488539 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.259385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CCACCCCCAC GCCGCTGGTG CCCAAACATC TTGGCCAATC GAGCGAACTG 
CCTGCCTCGC CCGAGGCCGC CGTGCTCGAC TATGTGCCCA ATCCGCGCGC GGGCGAGCTT
TATCTCGTCC GCTTCGCCGC GCCCGAGTTC ACCTCGCTCT GCCCGGTGAC CGGCCAGCCC
GATTTCGCGC ATCTGGTGAT CGACTATGCG CCCGGCGAAA CGATCGTCGA ATCGAAGAGC
CTCAAGCTGT TCCTCGGTTC TTTCCGCAAC CATGCCGGTT TTCACGAGGA TTGCACCGTC
GGCATCGGCC GCCGCCTGTT CGACGAGATG CAGCCGCAAT GGCTGCGCAT CGGCGGTTAC
TGGTATCCGC GCGGGGGCAT CCCGATCGAC GTTTTCTGGC AGTCGGGCCC GCCGCCTGCC
GGACTGTGGC TCCCCGACCA GGGCGTCGCG CCCTATCGCG GGCGGGGGTG A
 
Protein sequence
MTDSTPTPLV PKHLGQSSEL PASPEAAVLD YVPNPRAGEL YLVRFAAPEF TSLCPVTGQP 
DFAHLVIDYA PGETIVESKS LKLFLGSFRN HAGFHEDCTV GIGRRLFDEM QPQWLRIGGY
WYPRGGIPID VFWQSGPPPA GLWLPDQGVA PYRGRG