Gene Sala_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3061 
Symbol 
ID4082910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3212114 
End bp3212953 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content68% 
IMG OID638011447 
Product3-mercaptopyruvate sulfurtransferase 
Protein accessionYP_618098 
Protein GI103488537 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.122579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCT TGGTCTCAAC CGACTGGCTG GAACGCGAAC TGGGGGCATC GGACCTGCGG 
GTCGTCGATG CGACGAAATT CCTGGGGACC GATCGCGACG CGCGCGCCGA ATATGAGGCG
GGCCACATCC CCGGCGCGGT GTTCATGGAC CTCGCCGACC TGACCGACAC GTCCAGCGCG
ATCGAGAATA TGGCGCCGCC CGCCGAAAAA TTCGCCAGCC GGATGCAGTC GCTCGGCCTC
GGTGACGGCA GCCGCATCGT GCTTTACGAC GACAGCCCGC TCAAGAGCGC GGCGCGCGCC
TGGTGGCTGC TCAAATTGTT CGGCGCGCAT GACGTCGCGC TGCTCGACGG CGGGCTTGCC
AAGTGGAAGG CCGAGGGCCG CGCGCTCGAA ATGGGCAAGC AGACGCTGCG CCACCGTCAC
TTCACCGTCT GGCGCGATCC CAAGGCGGTG CGCACCAAGG AACAGATGCT CGCCAACCTG
GACAGCGGCG CCGAACAGGT CGTCGATGCG CGCCCCGCGG CGCGTTTCAC CGGTGAGGAA
CGCGATCCGC GCCCCGGCCT CGCGCCCGGC CATATTCCCG GTTCGCGCAG CCTGCCGCAC
AGCGAATTGT TCAACGCCGA CGGCACGTGG AAGCGCGGCG ACGCGCTGAA AGCCGCTTTC
GACGCCGCGG GAATCGACCT CGACAAACCA CTCGTCGCAA CCTGCGGCAG CGGCATGACC
GCCACCGTCG TCGCCTTTGG CGCCCACCTG CTCGGCAAGG ACGATGTCGC GGTCTATGAC
GGCAGCTGGC TCGAATGGGG CGCCGACGCC GCGACGCCCA AGGCGACCGG CGCAGCCTGA
 
Protein sequence
MDALVSTDWL ERELGASDLR VVDATKFLGT DRDARAEYEA GHIPGAVFMD LADLTDTSSA 
IENMAPPAEK FASRMQSLGL GDGSRIVLYD DSPLKSAARA WWLLKLFGAH DVALLDGGLA
KWKAEGRALE MGKQTLRHRH FTVWRDPKAV RTKEQMLANL DSGAEQVVDA RPAARFTGEE
RDPRPGLAPG HIPGSRSLPH SELFNADGTW KRGDALKAAF DAAGIDLDKP LVATCGSGMT
ATVVAFGAHL LGKDDVAVYD GSWLEWGADA ATPKATGAA