| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3059 |
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| Symbol | |
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| ID | 4082908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3209390 |
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| End bp | 3210592 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638011445 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_618096 |
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| Protein GI | 103488535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG ACGACGACAG CCTCCGCCCC GCGACGCGGC TCGTTCAGGG CGGGCGGCGG
CCCGAATGGA CCGGCGATCC GCGGCTGGGC GGCGGGATCG TCAATCCGCC CGTCTGGCGC
GCGTCGACGA TCCTGTACGA CACTGTCGCC GACCTGAAGG CGCGCGGTCA TGCGACGCAC
GACAAGCTTT ATTACGGCCG CCGCGGGACG CCGACGGTGT GGGCACTCGC CGACGCCCTG
ACGGCGATGG AGCCGGGCGC CGCAGGAACC TTGCTCTATC CCTCCGGGGT CGCCGCCAAT
TCGGCGGGGC TGCTCGCGCT GCTGTCGCCG GGCGATCACC TGCTGATGGT CGACAGCGCC
TATGAGCCGA CGCGCGCCTT CTGCGACGGG ATGCTCGCGC GGCTGGGCGT GACGACGACC
TATTATGATC CGCTCGTCGG TGCCGCGATC GCCGAACTGA TCCGCCCCGA AACGCGGCTG
ATCTTCCTCG AATCGCCGGG CAGCCTGACC TTCGAGGTGC AGGATGTGCC CGCGATCACC
GGCGTCGCGC GGGCACGCGG CGTGCTGACG ATGATCGACA ATACGTGGGC GACGCCCTTG
CTGTTTCCCG CGCTGGCGCA CGGGGTCGAT GTCGCGATGA TGAGCCTCAC CAAATATGTC
GGCGGGCACA GCGACGCGAT GATGGGCTCG CTCACCGCGA CGCGCGCCGT GTGGCCGAAG
CTGCGCAGCG CCGCCTATCA ACTCGGCCAG GCGGTGTCGC CCGACGATTG CGCGCTCATG
CTGCGCGGAC TGCGCACGCT CGACGTACGG ATGCAGCGCC ATGGCGAAAA TGGGCTTGTG
GTCGCAAACT GGCTTGCCGC GCGCGGCGAA GTCGGCCGCG TGCTCCATCC GGCGCTGGCA
GGCGATGGCG GCCATGCGAT CTGGGCGCGC GATTTTTCGG GCCCCAGCGG GCTGTTCGGC
TTCACGCTGA AGGGCGCCGA CGAGGGCGCG CGCACGCGCT TTATCGACGC ACTGACGCAA
TTCGGCATAG GCTTCAGCTG GGGCGGTTAT GAAAGCCTTG TCGTGCCCGC CGACCCGGCG
GGCATCCGCA CCGCGACACG CTGGACCGAC CCCGACCCGC TCGTCCGCCT GTCGATCGGG
CTCGAGGACC CGGCCGACCT GATCGCCGAC CTCGAGCGCG GCTTTGCCGC GATGACGGCA
TGA
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| Protein sequence | MTTDDDSLRP ATRLVQGGRR PEWTGDPRLG GGIVNPPVWR ASTILYDTVA DLKARGHATH
DKLYYGRRGT PTVWALADAL TAMEPGAAGT LLYPSGVAAN SAGLLALLSP GDHLLMVDSA
YEPTRAFCDG MLARLGVTTT YYDPLVGAAI AELIRPETRL IFLESPGSLT FEVQDVPAIT
GVARARGVLT MIDNTWATPL LFPALAHGVD VAMMSLTKYV GGHSDAMMGS LTATRAVWPK
LRSAAYQLGQ AVSPDDCALM LRGLRTLDVR MQRHGENGLV VANWLAARGE VGRVLHPALA
GDGGHAIWAR DFSGPSGLFG FTLKGADEGA RTRFIDALTQ FGIGFSWGGY ESLVVPADPA
GIRTATRWTD PDPLVRLSIG LEDPADLIAD LERGFAAMTA
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