Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3056 |
Symbol | |
ID | 4082905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3206592 |
End bp | 3207467 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011442 |
Product | 3-hydroxyisobutyrate dehydrogenase |
Protein accession | YP_618093 |
Protein GI | 103488532 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01692] 3-hydroxyisobutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.76812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CCTTTATCGG ACTCGGCAAC ATGGGCGGCG GGATGGCCGC GAACCTTGCG AAGGCGGGGC ATGACGTGCG CGCTTACGAC CTCAGCGAAG AGGCGTTGAC GCGCGCAGCC GATGCGGGCT GTTCGCGCGC GGCATCGGCG GCCGAAGCGG TGACCGGCGC CGAGGCCGTC GTTACCATGC TCCCCGCGGG CACGCATGTC GCGGGTGTTT ATGAAAACGA CGTCTTTCCG AACGCTGCGC CGGGCACGCT GCTCCTCGAC TGCTCGACGA TCGACGTCGC GACCGCGCGC TCGAACATCG AGGCCGCGAC CGCCAAGGGC CTCGTTGCGG TCGATGCGCC GGTGTCGGGC GGCATCGCCG CCGCCAATGC CGGCACGCTG ACCTTCATGG TCGGCGGCAC CGAAGAAGGC TTTGCGCGCG CGCAGCCGAT CCTTGCCAAA ATGGGCAAGG CGGTGATCCA CGCGGGCGAT GCGGGCGCGG GGCAGGCGGC GAAGATCTGC AACAACATGC TGCTCGGCGC GTCGATGGTC GCAACGTGCG AGACGCTCGC GCTCGCGCAG AAACTCGGGC TCGATCCGCA AAAATTCTTC GACATCGCTA GCGTCTCGTC GGGGCAATGC TGGTCGCTGA CCAGCTATGC GCCGCTCCCC GGCGTCGGTC CGGTCACGCC CGCCGACAAT GATTACAAGG GCGGGTTTGC CGCGGCGCTG ATGCTCAAGG ATCTGCGTCT CGCGATGGAA GCGGCGGCGA GCGTCAACGC CGACGTGCCG ATGGGGACGA AAGCGCGCGA GCTATACGAA GCCTTTGTCG AAGCCGACAA GGACGGTCGC GACTTTTCGG CGATCATCCG GACATTGCAG GGCTGA
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Protein sequence | MKIAFIGLGN MGGGMAANLA KAGHDVRAYD LSEEALTRAA DAGCSRAASA AEAVTGAEAV VTMLPAGTHV AGVYENDVFP NAAPGTLLLD CSTIDVATAR SNIEAATAKG LVAVDAPVSG GIAAANAGTL TFMVGGTEEG FARAQPILAK MGKAVIHAGD AGAGQAAKIC NNMLLGASMV ATCETLALAQ KLGLDPQKFF DIASVSSGQC WSLTSYAPLP GVGPVTPADN DYKGGFAAAL MLKDLRLAME AAASVNADVP MGTKARELYE AFVEADKDGR DFSAIIRTLQ G
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