Gene Sala_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3054 
Symbol 
ID4082903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3204523 
End bp3205581 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content64% 
IMG OID638011440 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_618091 
Protein GI103488530 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAGGTT TTATGATCGA AGACGTTCTT ATCTCGACCG ACGGCCGCAT CGGACGCATC 
GCGCTCAACC GCCCCAAGGC GATCCATGCG CTCAACCTCG CAATGTGTCA GGCGATGATC
GATGCGCTTT TGAAATGGCG TGCTGACGAT GGCATCGAAG CGGTGACCAT CGAGCATAGC
GAAGGCCGCG GCTTCTGCGC CGGCGGCGAC ATCCGTATGC TCGCGGAAAG TGGTGCGAAG
GACGGGGTCG AAGCGCGCCA ATTCTTCCAC ACCGAATATC GCCTCAACCA TCTGCTCTTC
ACCTATCCCA AGCCTGTCGT TGCCTTCATG GACGGCATCA CCATGGGCGG CGGCGTCGGC
ATTTCGCAGC CGGCCAAATA TCGCGTCGCG ACCGAACATA CCCGTTTTGC GATGCCTGAA
ACGGGGATCG GCCTGTTCCC CGACGTCGGC GGCGGCTGGT ATCTGCCGCG GCTCGAGGGG
CGCGTCGGCG TGTTCCTCGC GCTTACCGGC GCGCGGCTCG ACGGGGCGGA GTGCCTCGCG
CTCGGCCTCG CGACCCATTA TCTGCCGTCC GAAAAGCTTG CCGAGGCGAA GGCGCGCATC
GCCGCGCACC CCGACCGCAT CGGCGGCATA TTGGGCGAGC TGTCGGTCGC CGCACCGCCC
GCCGCGATCA CCCGGCATAT CGACAGGATC AACCGGCTGT TCGCCAGCGA CCGCTACGAG
GACATTCTCG CCGCGCTCGA AGCCGATGGC GGCGAATGGG CCGAAAAGGA ACTGGCCGCG
CTACACAGCA AATCGCCGCA GACATGCAAG GTCGCGCTGC GCCAGCTCAA GGAGGGGGCG
GTGATGCACG ACTTCGCCGC AGAGATGGCG CAGGAATATG CGATCGGCAG CCGCGTCGTT
CAGATGCACG ACTTCATCGA AGGCGTCCGC GCGCTGATAA TCGACAAGGA CAACAGCCCG
AAATGGAACC CGCCGACGCC GGAGGGCGTG ACCGACGACT GGATCGACGC GATATTCGCG
CCGCTGCCCG AAAACGAGAC ATGGACCCCT CTAACTTGA
 
Protein sequence
MRGFMIEDVL ISTDGRIGRI ALNRPKAIHA LNLAMCQAMI DALLKWRADD GIEAVTIEHS 
EGRGFCAGGD IRMLAESGAK DGVEARQFFH TEYRLNHLLF TYPKPVVAFM DGITMGGGVG
ISQPAKYRVA TEHTRFAMPE TGIGLFPDVG GGWYLPRLEG RVGVFLALTG ARLDGAECLA
LGLATHYLPS EKLAEAKARI AAHPDRIGGI LGELSVAAPP AAITRHIDRI NRLFASDRYE
DILAALEADG GEWAEKELAA LHSKSPQTCK VALRQLKEGA VMHDFAAEMA QEYAIGSRVV
QMHDFIEGVR ALIIDKDNSP KWNPPTPEGV TDDWIDAIFA PLPENETWTP LT