Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3047 |
Symbol | |
ID | 4083055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3198038 |
End bp | 3199330 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638011433 |
Product | mannitol dehydrogenase-like protein |
Protein accession | YP_618084 |
Protein GI | 103488523 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.116808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGCGC CGGGCTACGA CCGCGCCGCG CAGGCCGCCG GTATCGTTCA TATCGGCATC GGCGCCTTTC ACCGCGCGCA TCAGGCGGTT TACACCGACG ACGCGATGGG CGCGGGCGAC CGCGATTGGG GCATCATCGG TGTGTCGCTG CGCTCGGGCG TTGTCGCGGC GCAGCTGGGT CCGCAGGACG GGCTCTATAC CGTCAGCACG CGCAGCGCAG CGGGGAGCGC GCTGCGCCTG ATCGGCTCGG TGCAGCGGGT GCTCGTCGCG GCAGACGTGC CGCAGGGGGT GGTCGATGCC ATCGCGGCAT CCACGACGCA TATTGTCAGC TTCACAGTGA CCGAAAAGGG CTATCTGCGC GCCGCCGACG GCACGCTCGA CCTTGCGGCG GCCAACGGCA CGTCGAGCCT CTATCGCTTC GTCGGCGCCG CGCTCGCCGC GCGCCAAGCG GCAGGACTGT CGGGGCTGAC GCTGCTGAGC TGCGACAATC TGGCGAATAA CGGCGCCGTT CTGGGACGGC TGATGCGGCA GTATCTCGCC GCCGAGTATC CGGGTCTTGT CGATTGGTTC GATGCGAATT GCACCTGTCC CGCGACGATG ATCGACCGCA TCGTCCCCGC CACCACCGAC GCCGACCGCG CGGCGGTCGA AGCCGCGCTC GGCGCGCGCG ACGAGGGCGC CGTCGTCACC GAAGGCTTCA GCCAGTGGGT GATAGAGGAT GATTTCGCGG GCCCGCGCCC GCGTTGGGAG GCGGCCGGGG TCGAACTCGT CGCCGATGTC GCGCCCTATG AGACCGCGAA GCTCCGGATG CTCAACGGCG CGCATTCGGC GCTCGCCTAT ATCGGGCTGG GGCGCGGCCA TGATTTTGTC CATCAGGCGA TCGCCGATCC CGACATCTGC CCGGTGATCG AGCGGTTGAT GCGCGCCGAG GCCGCGCCGA CGATCGACGC GGCGCCGGGG CAGGATCTCG CCGCCTACGC CAGTGCGCTG CTCGATCGCT TCGCCAATCC GGCGCTCCAT CACCGGCTGA CCCAGATCGC GATGGACGGC AGCCAGAAGA TCCCGCAGCG CTGGCTGGAG ACGCTGGCGT GGCATCAGGC ACGCGGTGCG CGGTGCCCGT CGCTCGAAGC GGCCGTTGCG GCGTGGATCG CCTTTTTGCG GAGCGGTCAG CCGGTCGACG ATCCGCTGGC GGACAGGTTG CGCGAGGCGG CGGCGGGGCC CGATGCGATG GACCGACTCT TCGGCGAAGG CGGCCTGATC GCGTCGCAGT GGCAGCCCCG CAATCGAGAA TAA
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Protein sequence | MQAPGYDRAA QAAGIVHIGI GAFHRAHQAV YTDDAMGAGD RDWGIIGVSL RSGVVAAQLG PQDGLYTVST RSAAGSALRL IGSVQRVLVA ADVPQGVVDA IAASTTHIVS FTVTEKGYLR AADGTLDLAA ANGTSSLYRF VGAALAARQA AGLSGLTLLS CDNLANNGAV LGRLMRQYLA AEYPGLVDWF DANCTCPATM IDRIVPATTD ADRAAVEAAL GARDEGAVVT EGFSQWVIED DFAGPRPRWE AAGVELVADV APYETAKLRM LNGAHSALAY IGLGRGHDFV HQAIADPDIC PVIERLMRAE AAPTIDAAPG QDLAAYASAL LDRFANPALH HRLTQIAMDG SQKIPQRWLE TLAWHQARGA RCPSLEAAVA AWIAFLRSGQ PVDDPLADRL REAAAGPDAM DRLFGEGGLI ASQWQPRNRE
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