| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3042 |
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| Symbol | |
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| ID | 4083050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3191320 |
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| End bp | 3192933 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011428 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_618079 |
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| Protein GI | 103488518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.351967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.568346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACC GCCGCGATTT GCTCAAACTG GCCGGTACCG GCCTCGTCGC GACGGGGCTT
TCGGGCGTTG CGGGTCCGGC CGCGCTGGGG CAGGCCGCGT GTGCATCCCG GCCGTCGGTG
CCGGCGTGGG CCAAGGGTTT CGATGGCCAG CGTATCGCCG ACCTTGGCGA CGGGCGCTTC
CTCAATCCGA TCATGGCGGG CGATCATCCC GACCCGTCGA TCCTGAAGGA CGGCGCCGAT
TATTATATGA CCTTTTCGAC CTTCGACAGC TATCCGGGGC TGGTCATCTG GCATTCGCGC
GATCTGGTGA ACTGGCGCCC GGTCGGGCCC GCGCTGCACC GGAATATCGG GTCGGTCTGG
GCACCCGAAC TCTGCAAGCA TGGCGGGCGC TTCTATCTCT ACATTCCCAC GAAAGGGCCG
AACACGAGCT GGGTGATCTG GGCCGACCGG ATCGAGGGAC CGTGGAGCGA TCCGGTCGAC
CTGAACCTGC CCAACCACAT CGACCCCGGC CATGCGGTCG GCGAGGACGG GTCGCGCTGG
CTGTTCCTGT CGGGCGGCGA CCGCGTGCGG CTGTCGGACG ATGGGTGCAA GCGCATCGGC
GAACCCGAAC ATGTCTATGA CCCGTGGCGC TATCCATCCG ACTGGGTGGT CGAAGGCTTC
GCGCCCGAAG GGCCAAAGAT CACGCGGCAT GGCGACTATT ATTATATGAT CACCGCGGTC
GGCGGCACCG CAGGCCCGCC GACCGGCCAT ATGGTGATCG CCGCGCGCTC GACATCGATC
GACGGGCCGT GGGAAAATTG CCCGGCGAAC CCGCTCGTCC GCACGGTGTC GGCCGCCGAA
AAATGGTGGT CGCGCGGCCA TGCGACGCTT GTCGAGGGGC CTGCGGGCGA CTGGTGGGCG
GTCTATCACG GCTATGAGAA TGGCTTTTGG ACCCTGGGGC GGCAGGCCTT GCTCGACCCC
GTCGAATGGA CCGACGATGG CTGGTTGCGC ATGACGGGCG GCGATTTGTC GCAGCCGATC
GCCAAGCCGA AAGGCGGCAG CGTCGCGGGG CCGCATGGTA TGGCGCTGTC GGACGATTTT
TCGTCGCTCG CGCTCGGCGC CAAGTGGAAC TTCTTCAAGC CCGCGTCGGA CGAACACCGT
CGCGCGCGTG TCGAGGACGG CGCGCTGGTG CTGACGGCGC GCGGGGAGGC ACCGGTCGAT
TCATCGCCGC TGCTGCTGAT CGCGGGCGAC CATGCGTATC GTTTCGAATG CGATATCGAG
ATCGCGCCCG GCGGCACCGC GGGGCTGATC CTTTTCTATG ACGAGAAACT CTATTGCGGA
CTCGGCTTTG ACCGCGATCG CTTCGTGACG CATCAATATG GCATCGAACG CGCGCGGCCG
GTCAATCCGC ACGGGACACG GATGCGGATG CGCGTCACCA ACGACCGGCA TATCGTGACT
TATGACACCA GCGGCGACGG CGGACGGACC TGGGTGCGCT TCGACCGGGG GATGGAGGTG
TCGGGATACC ACCATAATGT GCGCGGCGGC TTCCTGATGC TGCGCCCCGG CCTCTATTCG
GCGGGCGCCG GCGAGGCGCG CTTTCGCAAT TTCACCTTCC GCGCGCTCGA TTAA
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| Protein sequence | MTDRRDLLKL AGTGLVATGL SGVAGPAALG QAACASRPSV PAWAKGFDGQ RIADLGDGRF
LNPIMAGDHP DPSILKDGAD YYMTFSTFDS YPGLVIWHSR DLVNWRPVGP ALHRNIGSVW
APELCKHGGR FYLYIPTKGP NTSWVIWADR IEGPWSDPVD LNLPNHIDPG HAVGEDGSRW
LFLSGGDRVR LSDDGCKRIG EPEHVYDPWR YPSDWVVEGF APEGPKITRH GDYYYMITAV
GGTAGPPTGH MVIAARSTSI DGPWENCPAN PLVRTVSAAE KWWSRGHATL VEGPAGDWWA
VYHGYENGFW TLGRQALLDP VEWTDDGWLR MTGGDLSQPI AKPKGGSVAG PHGMALSDDF
SSLALGAKWN FFKPASDEHR RARVEDGALV LTARGEAPVD SSPLLLIAGD HAYRFECDIE
IAPGGTAGLI LFYDEKLYCG LGFDRDRFVT HQYGIERARP VNPHGTRMRM RVTNDRHIVT
YDTSGDGGRT WVRFDRGMEV SGYHHNVRGG FLMLRPGLYS AGAGEARFRN FTFRALD
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