Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3026 |
Symbol | |
ID | 4082857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3169757 |
End bp | 3172177 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638011412 |
Product | DEAD/DEAH box helicase-like protein |
Protein accession | YP_618063 |
Protein GI | 103488502 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTCC CCGCCCCCTT TGCCGACTGG TTCGCTGCGC GGGGATGGCG GCTGCGGCGC CATCAGGCCG ATATGCTCGC CGCGGCCGGG CGCGGCGATC ATGCGCTGCT CGTCGCGGCG ACGGGCGCGG GCAAGACGCT TGCGGGTTTC CTGCCCAGCC TCGTCGATCT TGCGGCGCGT CCCTCCGACC GGCTGCACAC CCTCTATGTC TCGCCGCTGA AGGCCCTGGC CGCCGACGTC GAACGCAATC TGCTGGGGCC GATCGCCGAC ATGGGGCTGG GCATCAGCGT CGAGAGCCGC AGCGGCGACA CGTCGTCCGA CAAAAAGGCG CGCCAACGCA GCCGCCCGCC CAACATCTTG CTCACCACCC CCGAATCGCT CTCGCTTCTG CTGTCCTGGC CTGACAGCTT CACCATGTTC GCCGACCTCA AGACCGTGGT GATCGACGAG ATTCACGCCT TCGCGCCCGG CAAACGCGGC GATTTGCTGA GCCTTGCGCT GGCGCGGCTC CAGAAAATCG CCCCGGATCT ACGCCGCGTC GGCCTGTCGG CGACGATCGC CGACCCCGAT CAATATCGCG CCTGGCTCGC GCCCGACGCC GATGCGGACA AGGTCGCGCT CGTCGCGGGC GAGGCGGGCG CCGATCCCGC CATTTCCATC CTGCTGCCCG AAGGCGCGGT GCCCTGGGCG GGCCATTCGG GGCGCTGGGC GGTGCATCAG GTGATGGCGG AGGTCGCGAA AAACCGGACG ACGATCATCT TCTGCAACAC GCGCGGGCTT GCCGAGCTGA TCTTTCAGGA ATTGTGGAAG GTCAACGACC TGTCGCTTCC CATCGCGATC CACCACGGCA GCCTCGACCG CGAGGCGCGC CAGCGCGCGG AAGCGGCGAT GGCCGAAGGG CGGCTGCGCG CGCTCGTCGC GACCTCCAGC CTCGACCTGG GGCTCGACTG GGGCGATGTC GATTGCGTGA TCCAGATGGG CGCCCCCAAG GGGGCGTCGC GGCTGCTTCA GCGCATCGGC CGCGCCAATC ACCGCCTCGA CGAGCCGAGC CGCGCGCTGA TCGTGCCCGG CAACCGCTTC GAATATCTCG AGGCGCGCGC AGCATTGGAC GCGGTCGAGG CCGGGGAGCG CGATGCCGAC CGCTTCCGCC CCGGTGCGCT CGACGTGCTC GCGCAGCATG TGATGGCGCT CGCCTGCGCG GCTCCGTTTC AGGAGGAGGC GCTGCTCGCC GAGATCCGCG GCGCGACGCC CTATCGCTGG ATCGACGCCG ACGTCTTTGC CCGCCTCCTC GGCTTCGTGC GCGACGGCGG CTATGCGCTC AAAAGCTATG ACCGCTTCCT CCGCCTCGCA CCCGACGGGC CCCAGGGCCC CGATCGCGGG TGGCGCATCG CGCACCCGCG GCTCGCGGCG CAGCACCGGC TGAACGCCGG GATCATCGTT GACGCGCCGA CGCTCGACGT GCGTTTCAAG AACGGCCGTC GGCTGGGTAG CGTCGAGGAA TATTTCGCGA GCACTTTGGT TCCGGGCGAC ACTTTTGCCT TCGCGGGCCT GAGCCTCGAG GTCGAGTCGA TCCGCGACTC CGACCTGATC GTGCGCGCGA CGACGCGGCC CGCGCGCATT CCGTCCTATA TGGGCGCGCG CATGGCGCTC TCGACGCGGC TCGCCGACCG GGTGCGCGGC TTCCTCGCCG ACCCCGCGAG CTGGTCGCGC TTCCCCGCTG ATGTGCGCTT CTGGCTGGAG ATGCAGCAAT TGCGCTCGGC GCTGCCGCGT GCGGGCGAAT TGCTCGTCGA AAGCTTCCCG CACGAAGGGC TGCACTATCT GGTCGCCTAT CCGTTCGAGG GATGGAATGC GCACCAGTCG CTGGGCATGC TCGTCACCAA GCGGATGGAC CGTGCGGGGT TGCAGCCGAT GGGGTTCGTC GCCTCCGACT ATGCGCTGGC GATCTGGTCG CTGCGGCCCG TGACCGCTCC CGAAAGGCTG TTCGACGCCG AAATCCTCTC GGACGAGTTT GTCGAATGGG TCGAAAACTC GCATCTTCTG AAGCGCGCCT TTCGCGAGGT GGCGGTGATC GGCGGACTGA TCGCGCGCCA GCATCCGGGC AAGCGCAAGA CGGGCAAGCA GGTCACCTTT TCGACCGACC TCATCTTCGA CGTGCTCCGC AAATATGAGC CCGACCATCT GCTGCTGGAA GCGGCCTGGG CCGATGCGCG CGCGCGTTTG ACCGACGTCG GGCGGCTGGG CGACCTGCTC GACCGCGCGG CGGGGACGAT GCGGCATGTG ACGCTCGATC GCATCAGCCC GCTTGCAATT CCGGTGCTCG TGCTGATCGG CCGCGAAAGC GTCGCGGCGT CCGACCTCGA CGATGCGCTG CTCGGCGAGC TCGCCGACAC GCTCGCCCGC ACCGCGATGC GGGCGGATTG A
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Protein sequence | MRLPAPFADW FAARGWRLRR HQADMLAAAG RGDHALLVAA TGAGKTLAGF LPSLVDLAAR PSDRLHTLYV SPLKALAADV ERNLLGPIAD MGLGISVESR SGDTSSDKKA RQRSRPPNIL LTTPESLSLL LSWPDSFTMF ADLKTVVIDE IHAFAPGKRG DLLSLALARL QKIAPDLRRV GLSATIADPD QYRAWLAPDA DADKVALVAG EAGADPAISI LLPEGAVPWA GHSGRWAVHQ VMAEVAKNRT TIIFCNTRGL AELIFQELWK VNDLSLPIAI HHGSLDREAR QRAEAAMAEG RLRALVATSS LDLGLDWGDV DCVIQMGAPK GASRLLQRIG RANHRLDEPS RALIVPGNRF EYLEARAALD AVEAGERDAD RFRPGALDVL AQHVMALACA APFQEEALLA EIRGATPYRW IDADVFARLL GFVRDGGYAL KSYDRFLRLA PDGPQGPDRG WRIAHPRLAA QHRLNAGIIV DAPTLDVRFK NGRRLGSVEE YFASTLVPGD TFAFAGLSLE VESIRDSDLI VRATTRPARI PSYMGARMAL STRLADRVRG FLADPASWSR FPADVRFWLE MQQLRSALPR AGELLVESFP HEGLHYLVAY PFEGWNAHQS LGMLVTKRMD RAGLQPMGFV ASDYALAIWS LRPVTAPERL FDAEILSDEF VEWVENSHLL KRAFREVAVI GGLIARQHPG KRKTGKQVTF STDLIFDVLR KYEPDHLLLE AAWADARARL TDVGRLGDLL DRAAGTMRHV TLDRISPLAI PVLVLIGRES VAASDLDDAL LGELADTLAR TAMRAD
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