| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3026 |
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| Symbol | |
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| ID | 4082857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3169757 |
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| End bp | 3172177 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011412 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_618063 |
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| Protein GI | 103488502 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCC CCGCCCCCTT TGCCGACTGG TTCGCTGCGC GGGGATGGCG GCTGCGGCGC
CATCAGGCCG ATATGCTCGC CGCGGCCGGG CGCGGCGATC ATGCGCTGCT CGTCGCGGCG
ACGGGCGCGG GCAAGACGCT TGCGGGTTTC CTGCCCAGCC TCGTCGATCT TGCGGCGCGT
CCCTCCGACC GGCTGCACAC CCTCTATGTC TCGCCGCTGA AGGCCCTGGC CGCCGACGTC
GAACGCAATC TGCTGGGGCC GATCGCCGAC ATGGGGCTGG GCATCAGCGT CGAGAGCCGC
AGCGGCGACA CGTCGTCCGA CAAAAAGGCG CGCCAACGCA GCCGCCCGCC CAACATCTTG
CTCACCACCC CCGAATCGCT CTCGCTTCTG CTGTCCTGGC CTGACAGCTT CACCATGTTC
GCCGACCTCA AGACCGTGGT GATCGACGAG ATTCACGCCT TCGCGCCCGG CAAACGCGGC
GATTTGCTGA GCCTTGCGCT GGCGCGGCTC CAGAAAATCG CCCCGGATCT ACGCCGCGTC
GGCCTGTCGG CGACGATCGC CGACCCCGAT CAATATCGCG CCTGGCTCGC GCCCGACGCC
GATGCGGACA AGGTCGCGCT CGTCGCGGGC GAGGCGGGCG CCGATCCCGC CATTTCCATC
CTGCTGCCCG AAGGCGCGGT GCCCTGGGCG GGCCATTCGG GGCGCTGGGC GGTGCATCAG
GTGATGGCGG AGGTCGCGAA AAACCGGACG ACGATCATCT TCTGCAACAC GCGCGGGCTT
GCCGAGCTGA TCTTTCAGGA ATTGTGGAAG GTCAACGACC TGTCGCTTCC CATCGCGATC
CACCACGGCA GCCTCGACCG CGAGGCGCGC CAGCGCGCGG AAGCGGCGAT GGCCGAAGGG
CGGCTGCGCG CGCTCGTCGC GACCTCCAGC CTCGACCTGG GGCTCGACTG GGGCGATGTC
GATTGCGTGA TCCAGATGGG CGCCCCCAAG GGGGCGTCGC GGCTGCTTCA GCGCATCGGC
CGCGCCAATC ACCGCCTCGA CGAGCCGAGC CGCGCGCTGA TCGTGCCCGG CAACCGCTTC
GAATATCTCG AGGCGCGCGC AGCATTGGAC GCGGTCGAGG CCGGGGAGCG CGATGCCGAC
CGCTTCCGCC CCGGTGCGCT CGACGTGCTC GCGCAGCATG TGATGGCGCT CGCCTGCGCG
GCTCCGTTTC AGGAGGAGGC GCTGCTCGCC GAGATCCGCG GCGCGACGCC CTATCGCTGG
ATCGACGCCG ACGTCTTTGC CCGCCTCCTC GGCTTCGTGC GCGACGGCGG CTATGCGCTC
AAAAGCTATG ACCGCTTCCT CCGCCTCGCA CCCGACGGGC CCCAGGGCCC CGATCGCGGG
TGGCGCATCG CGCACCCGCG GCTCGCGGCG CAGCACCGGC TGAACGCCGG GATCATCGTT
GACGCGCCGA CGCTCGACGT GCGTTTCAAG AACGGCCGTC GGCTGGGTAG CGTCGAGGAA
TATTTCGCGA GCACTTTGGT TCCGGGCGAC ACTTTTGCCT TCGCGGGCCT GAGCCTCGAG
GTCGAGTCGA TCCGCGACTC CGACCTGATC GTGCGCGCGA CGACGCGGCC CGCGCGCATT
CCGTCCTATA TGGGCGCGCG CATGGCGCTC TCGACGCGGC TCGCCGACCG GGTGCGCGGC
TTCCTCGCCG ACCCCGCGAG CTGGTCGCGC TTCCCCGCTG ATGTGCGCTT CTGGCTGGAG
ATGCAGCAAT TGCGCTCGGC GCTGCCGCGT GCGGGCGAAT TGCTCGTCGA AAGCTTCCCG
CACGAAGGGC TGCACTATCT GGTCGCCTAT CCGTTCGAGG GATGGAATGC GCACCAGTCG
CTGGGCATGC TCGTCACCAA GCGGATGGAC CGTGCGGGGT TGCAGCCGAT GGGGTTCGTC
GCCTCCGACT ATGCGCTGGC GATCTGGTCG CTGCGGCCCG TGACCGCTCC CGAAAGGCTG
TTCGACGCCG AAATCCTCTC GGACGAGTTT GTCGAATGGG TCGAAAACTC GCATCTTCTG
AAGCGCGCCT TTCGCGAGGT GGCGGTGATC GGCGGACTGA TCGCGCGCCA GCATCCGGGC
AAGCGCAAGA CGGGCAAGCA GGTCACCTTT TCGACCGACC TCATCTTCGA CGTGCTCCGC
AAATATGAGC CCGACCATCT GCTGCTGGAA GCGGCCTGGG CCGATGCGCG CGCGCGTTTG
ACCGACGTCG GGCGGCTGGG CGACCTGCTC GACCGCGCGG CGGGGACGAT GCGGCATGTG
ACGCTCGATC GCATCAGCCC GCTTGCAATT CCGGTGCTCG TGCTGATCGG CCGCGAAAGC
GTCGCGGCGT CCGACCTCGA CGATGCGCTG CTCGGCGAGC TCGCCGACAC GCTCGCCCGC
ACCGCGATGC GGGCGGATTG A
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| Protein sequence | MRLPAPFADW FAARGWRLRR HQADMLAAAG RGDHALLVAA TGAGKTLAGF LPSLVDLAAR
PSDRLHTLYV SPLKALAADV ERNLLGPIAD MGLGISVESR SGDTSSDKKA RQRSRPPNIL
LTTPESLSLL LSWPDSFTMF ADLKTVVIDE IHAFAPGKRG DLLSLALARL QKIAPDLRRV
GLSATIADPD QYRAWLAPDA DADKVALVAG EAGADPAISI LLPEGAVPWA GHSGRWAVHQ
VMAEVAKNRT TIIFCNTRGL AELIFQELWK VNDLSLPIAI HHGSLDREAR QRAEAAMAEG
RLRALVATSS LDLGLDWGDV DCVIQMGAPK GASRLLQRIG RANHRLDEPS RALIVPGNRF
EYLEARAALD AVEAGERDAD RFRPGALDVL AQHVMALACA APFQEEALLA EIRGATPYRW
IDADVFARLL GFVRDGGYAL KSYDRFLRLA PDGPQGPDRG WRIAHPRLAA QHRLNAGIIV
DAPTLDVRFK NGRRLGSVEE YFASTLVPGD TFAFAGLSLE VESIRDSDLI VRATTRPARI
PSYMGARMAL STRLADRVRG FLADPASWSR FPADVRFWLE MQQLRSALPR AGELLVESFP
HEGLHYLVAY PFEGWNAHQS LGMLVTKRMD RAGLQPMGFV ASDYALAIWS LRPVTAPERL
FDAEILSDEF VEWVENSHLL KRAFREVAVI GGLIARQHPG KRKTGKQVTF STDLIFDVLR
KYEPDHLLLE AAWADARARL TDVGRLGDLL DRAAGTMRHV TLDRISPLAI PVLVLIGRES
VAASDLDDAL LGELADTLAR TAMRAD
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