| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3020 |
|---|
| Symbol | leuS |
|---|
| ID | 4082852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3164036 |
|---|
| End bp | 3166585 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638011407 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_618058 |
|---|
| Protein GI | 103488497 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.336439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG AAACGCGCTT TGGCGCCCTC GCCGCCGACG CCCGCTGGCA AAAGGCATGG
GAGGCGGCGA ACAGCTTTGC CACGACCGAT AGCGGCCAAA AACCGAAGGC CTATATCCTC
GAGATGTTCC CCTATCCATC GGGGCGCATC CATATGGGGC ATGTCCGCAA CTATGCGATG
GGCGACGTGC TCGCGCGGTT CAAGCGGATG ACCGGGCACG ACGTGCTGCA CCCGATGGGC
TGGGACGCCT TCGGGATGCC GGCGGAAAAT GCGGCGATGG AAAAGGGCGT CCATCCGGGC
GGCTGGACGC GCGCCAATAT CGACGCGATG CGTGCGCAGT TGAAGCGCCT TGGCCTCGCG
ATCGACTGGA GCCGCGAGCT TGCGACGTGC GAACCCGATT ATTACGGGCA GGAACAGGCG
CTTTTCCTCG ACCTCCATGC CGCTGGGCTG GTCTATCGCA AGGAAAGCTA CGTCAACTGG
GACCCCGTCG ACATGACCGT GCTCGCGAAC GAGCAGGTGA TCGACGGCCG CGGCTGGCGC
TCGGGCGCCC TCGTCGAAAA GAAAAAGCTG TCGCAGTGGT TCCTCAAGAT CACCGACTTT
GCCGACGAAC TGCTCGAAGG GCTGGGCAGC CTCGACAAAT GGCCCGACAA GGTGCGGCTG
ATGCAGGAAA ACTGGATCGG CAAGTCGCAG GGGCTGGAGT TTTCCTTCAA GTTCGCCGGC
GGCGCGCCGG CCTTCGCCGT TTTCACGACG CGCCCCGACA CGCTTTACGG CGCGAGCTTC
GCCGCGATTT CGCCCGACCA TCCGCTCGCG GAGAAGCTGG CGAAGGATTC GCCCGAACTG
GCGGCGTTCA TCGCCGAGTG CCGCCGCCAG GGCACATCGG CCGAGCAGCT CGAAACCGCC
GAGAAGCTGG GTTTCGACAC CGGACTGGCG GTCGAGCATC CGCTCGATCC CGACTGGCAC
CTGCCCGTCT GGGTCGTCAA TTATGTGCTG ATGGATTATG GCACCGGCGC GATCTTCGGT
TGCCCCGCGC ACGACCAGCG CGACCTCGAT TTCGCGCATA AATATGAGCT GCCCGTCCAC
CGCGTGATCG CCGACGGTGA CGAGACGGCG CAGCATTTCA CCGGCAGCGA AGCCTATACC
GGCCCCGGCA AGCTGGTGAA CAGCCACTTC CTCGACGGGA TGAGCATCGA CGAGGCGAAG
GCGGCGGTCA TCACCCGCGC CGAGCATGAA GGCTGGGGCA AGGGCACGAC CGTCTGGCGC
CTGCGCGACT GGGGCGTGTC GCGCCAGCGC TATTGGGGCA CGCCCATCCC CTTCATCCAC
TGCGCCGCTT GCGGGACGGT GCCGGTGCCC AAGAGCCAAC TTCCCGTCAC CCTGCCCGAC
GATGTCGATT TTTCGGTCCC CGGCAATCCG CTCGACCGTC ATCCGACGTG GAAGCATGTT
GCCTGTCCGA TCTGCGAGGG TGCGGCGCTG CGCGAAACCG ACACGCTCGA CACCTTCGTC
GATTCGAGCT GGTATTTCCT GCGCTTCGCC TCGGCGCCGA CGGACAAGCC GTTCGACCCG
GAGGTGATCC GCCGCTGGCT GCCGGTCGAC CAATATATCG GCGGCATCGA ACATGCGATC
CTCCACCTGC TCTATGCGCG CTTCTGGACG CGCGCGCTGA ACAAGCTCGG CATGATCGAC
ATCGAGGAAC CCTTCGCGAG CCTGTTCACG CAGGGGATGG TGACGCACGA AACCTATAGC
CGGCCGCAGG GGGAAGGCCT GCCACCGCTC TATTTCACCC CCGACGAGGT CGAGCGCGGC
GCCGACGGCG CGACGCTGAT CGCCGACGGC GCGCCGGTCG AGGTCGGCCG CGTCATCAAG
ATGTCGAAGT CGAAGAAGAA TGTCGTCGAT CCCGACGCCA TCCTCGACCA ATATGGCGCC
GACGCCGTGC GCTGGTTCAT GCTCTCGGAC AGTCCGCCCG AGCGCGACCT GCCATGGAGC
GAGGCGGGGA TCGAGGGCGC GTGGCGCTTT GTCCAGCGGC TGTGGCGGCT GTTCGGTGAG
ACCGAGAATG TCGGCGACGG CGGCGAGGAC AAGGGCCTCG CGCGCAAACT GCATCAGACG
ATCGCGGGGG TCGCCGCCGA CATCGAGGCG CTCGGCTTCA ACAAGGCGGT GGCGAAAATC
CACGCGCTCG CCAACGAGAT CGAGAAGGCG AAACCTTCGG CGACGCGCGC CGAGGCGTGC
GCCAAGCTGA TCCTGCTCGT CGCGCCGATG ATGCCGCACC TTGCCGAAGA GGCCTGGACG
GCGCTCCCGG CAAGCCAGCG CACGACACCG ATGGTCGCCG ATGCCGCCTG GCCCGCCGCC
GATCCCGCGC TGCTGATCGA TGACGAGGTG ACGATCGCGA TCCAGATGGC CGGCAAGCTG
CGCGATACGA TGACGGTGGC CAAGGGCGCC GACAAGGCGG CGCTCGAAGC CGCGGCGCTG
GCGCGCCCGC GCATCGTCGA ACTGCTCGGC GGCGCGGCGC CGAAGAAGGT GATTGTCGTG
CCCGACCGGC TCGTCAATAT CCTTCCCTGA
|
|---|
| Protein sequence | MTRETRFGAL AADARWQKAW EAANSFATTD SGQKPKAYIL EMFPYPSGRI HMGHVRNYAM
GDVLARFKRM TGHDVLHPMG WDAFGMPAEN AAMEKGVHPG GWTRANIDAM RAQLKRLGLA
IDWSRELATC EPDYYGQEQA LFLDLHAAGL VYRKESYVNW DPVDMTVLAN EQVIDGRGWR
SGALVEKKKL SQWFLKITDF ADELLEGLGS LDKWPDKVRL MQENWIGKSQ GLEFSFKFAG
GAPAFAVFTT RPDTLYGASF AAISPDHPLA EKLAKDSPEL AAFIAECRRQ GTSAEQLETA
EKLGFDTGLA VEHPLDPDWH LPVWVVNYVL MDYGTGAIFG CPAHDQRDLD FAHKYELPVH
RVIADGDETA QHFTGSEAYT GPGKLVNSHF LDGMSIDEAK AAVITRAEHE GWGKGTTVWR
LRDWGVSRQR YWGTPIPFIH CAACGTVPVP KSQLPVTLPD DVDFSVPGNP LDRHPTWKHV
ACPICEGAAL RETDTLDTFV DSSWYFLRFA SAPTDKPFDP EVIRRWLPVD QYIGGIEHAI
LHLLYARFWT RALNKLGMID IEEPFASLFT QGMVTHETYS RPQGEGLPPL YFTPDEVERG
ADGATLIADG APVEVGRVIK MSKSKKNVVD PDAILDQYGA DAVRWFMLSD SPPERDLPWS
EAGIEGAWRF VQRLWRLFGE TENVGDGGED KGLARKLHQT IAGVAADIEA LGFNKAVAKI
HALANEIEKA KPSATRAEAC AKLILLVAPM MPHLAEEAWT ALPASQRTTP MVADAAWPAA
DPALLIDDEV TIAIQMAGKL RDTMTVAKGA DKAALEAAAL ARPRIVELLG GAAPKKVIVV
PDRLVNILP
|
|---|
| |