| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3012 |
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| Symbol | |
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| ID | 4082842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3152830 |
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| End bp | 3155142 |
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| Gene Length | 2313 bp |
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| Protein Length | 770 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011397 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_618050 |
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| Protein GI | 103488489 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.853588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCATC CCCCCGCCTC GACGCCTGAC CTCCCCCGCC CCGACCCTTC GGACCCGCCC
TATCTGCACG GCCTGAACGG GCCGCAGCGG CAGGCGGTCC TCACTACCGA AGGGCCGGTG
CTGATGCTTG CCGGCGCCGG TACGGGCAAG ACCGCCGCGC TCACCGCGCG CCTCGCGCAC
ATCATCGCCA CGCGGCGGGC ATGGCCGTCC GAAATCCTCG CCGTCACCTT CACCAACAAG
GCGGCGCGCG AGATGCGCGA GCGGATCGGG CGAATGATCG GCGACGCGGT CGAGGGGATG
CCCTGGCTCG GCACCTTTCA CAGCATTTGC GCCAGGATGC TGCGCCGTCA TGCCGAACTG
GTGGGCCTGC AAAGCAATTT CACCATCCTC GATACCGACG ACCAGCTTCG CGTCCTCAAA
CAGCTGATTC AGGCCGAGGG GCTCGACGAG AAGCGCTGGC CGGCGCGCCA GCTCGCCGGG
CTGATCGACA AATGGAAAAA CCGCGGCCTC ACCCCCGCCG ACCTCGATGC CGCCGACAAG
GAGGCCTATG CCGACGGCAA GGGGCAGCAT TTCTATGCGC TCTATCAGGC ACGGCTGAAA
ACGCTGAATG CCTGCGATTT CGGCGACCTC CTGCTGCACA TGCTGGTGAT CCTGAAGACG
CACCGCGACG TGCTCGAACA ATATCAGGCG CGTTTCAAAT ATATCCTCGT CGACGAGTAT
CAGGACACCA ATGCCAGCCA GTATCTCTGG CTCCGCCTGC TCGCGCAAAG CCGCAAAAAC
ATCTGCTGTG TCGGCGACGA CGACCAGTCG ATCTATTCGT GGCGCGGCGC CGAGGTCGCG
AACATCCTGC GCTTCGAAAA GGATTTTCCC GGCGCGACGG TGATCCGCCT CGAACAGAAT
TACCGCTCGA CGCCGCAGAT CCTGGCGGCC GCGTCGGCGC TCATCGCGCA GAACTCGGAC
CGGCTCGGCA AGACGCTGTG GACCGAGCTC GACGCGGGCG ACAAGCTGCG CGTCGTCGGC
GTGTGGGACG GGCCGGAGGA AGCACGCCGG ATCGGCGAAG AACTGGAAAC GCTCCAGCAT
CGGGGCGTGA ACCTCGACCG CACCGCCATT CTTGTCCGCG CGCAGTTCCA GACGCGCGAG
TTCGAGGACC GCTTCATCGC GATCGGCTTG CCCTACCGCA TCGTCGGGGG TTTCCGCTTC
TATGAACGCG CCGAAATCCG CGACGCCCTC GCCTACCTTC GCCTCGTCCA GTCGAGCGCC
GACGACCTCG CCTTCGAGCG CATCGTCAAC GTCCCCAAAC GCGGGCTGGG CGACAAGGCG
CTGCAACGCA TCCACCAGTT CGCGCGGGCC GAGCGCGCGC CGCTGTTCCA CGCCGCCTCG
CGGATCACCG AAACCGACGA ACTGACCCCG CAGGCCCGCC GTCAGCTCGC CAGTTTCATC
GCCCAGATGC GGAATTGGCA GGCGAAGGTC GGCGAACTCT CGCACCCCGA GCTGACGCAG
CTCATCCTCG ACGAATCGGG CTACACCGCG ATGCTGCAGG CCGACCGCAG CGCCGAAGCC
GCGGGGCGCC TCGAAAACCT CTCCGAACTC GTCCGGGCGA TGGAAGAGTA TGACTCGCTC
GAAGCCTTCC TCGAGCATGT CAGCCTCGTC ATGGACCGCG ACAATGACGA GTCGGCCGAA
ACCGTCACGA TCATGACGAT CCACGCCGCC AAGGGGCTCG AGTTCGACCA TGTCTTCCTT
GCGGGGTGGG AGGATGGCGT TTTCCCGTCG CAGCGCGCGA TGGACGAAGG CGGCACCGCC
AGCCTCGAAG AAGAACGGCG CCTCGCCTAT GTCGCGATCA CCCGCGCGCG CCGGCGCGCG
AGCATCTATC ACGCCGCGAA CCGCCGCATC TATGGCCAGT GGATGAGCAG CATCCCCAGC
CGCTTCATCG CCGAAATCCC GCCCGACCAT ATCGAGATGG AAAACAGCTT CGGCGGCGGG
CAGAGCCTGT GGCGCGCCAA TTGGTCGGCG CAGGGCGATC CCTTCGCGCA TGTCGCTGAA
CGCCAGCCAT CGCGAACGAT GACGCGCGGC CCCGCGTGGC AGCGCGCGGT AGCGGCATCG
AACACCGTCA CCCGCGCTCC GGCGCCCTCC GAACGCGGCC CCGCCGCGTC GGTCGGCGCC
AAGCCGCGCG CCGACCTCGC GATCGGGCAG CGCGTGTTCC ACGAGAAGTT CGGCTACGGC
GAAATCATCG ACATCGACGG CAACAAGCTG GAGGTCGAGT TCGACCAGGC GGGATCGAAA
CGCGTGCTCG ACAGTTTCGT CCGCGCCGCC TGA
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| Protein sequence | MPHPPASTPD LPRPDPSDPP YLHGLNGPQR QAVLTTEGPV LMLAGAGTGK TAALTARLAH
IIATRRAWPS EILAVTFTNK AAREMRERIG RMIGDAVEGM PWLGTFHSIC ARMLRRHAEL
VGLQSNFTIL DTDDQLRVLK QLIQAEGLDE KRWPARQLAG LIDKWKNRGL TPADLDAADK
EAYADGKGQH FYALYQARLK TLNACDFGDL LLHMLVILKT HRDVLEQYQA RFKYILVDEY
QDTNASQYLW LRLLAQSRKN ICCVGDDDQS IYSWRGAEVA NILRFEKDFP GATVIRLEQN
YRSTPQILAA ASALIAQNSD RLGKTLWTEL DAGDKLRVVG VWDGPEEARR IGEELETLQH
RGVNLDRTAI LVRAQFQTRE FEDRFIAIGL PYRIVGGFRF YERAEIRDAL AYLRLVQSSA
DDLAFERIVN VPKRGLGDKA LQRIHQFARA ERAPLFHAAS RITETDELTP QARRQLASFI
AQMRNWQAKV GELSHPELTQ LILDESGYTA MLQADRSAEA AGRLENLSEL VRAMEEYDSL
EAFLEHVSLV MDRDNDESAE TVTIMTIHAA KGLEFDHVFL AGWEDGVFPS QRAMDEGGTA
SLEEERRLAY VAITRARRRA SIYHAANRRI YGQWMSSIPS RFIAEIPPDH IEMENSFGGG
QSLWRANWSA QGDPFAHVAE RQPSRTMTRG PAWQRAVAAS NTVTRAPAPS ERGPAASVGA
KPRADLAIGQ RVFHEKFGYG EIIDIDGNKL EVEFDQAGSK RVLDSFVRAA
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