| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3002 |
|---|
| Symbol | |
|---|
| ID | 4082946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3145125 |
|---|
| End bp | 3146006 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638011387 |
|---|
| Product | chromosome partitioning ATPase protein-like protein |
|---|
| Protein accession | YP_618040 |
|---|
| Protein GI | 103488479 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.150485 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATCAT TTCGCGCGTC GGTCGCCCAT GCCGCGCCAA CAGGAAAATC GCAACGCCCC
ATGACGAACT CCGCGACGAC CCCCGCTCCG CACCGCATCA TCTTTGCCAA TGAAAAGGGC
GGAACGGGCA AATCGACCTG CGCCGTGCAT TTCGCGGTTG CGCTGGCAAG CCAGGGCTGG
CGCGTCGCGG GGATCGACCT CGACCCCCGC CAGCGCACCT TTCATCGCTA TCTCGAGAAT
CGCACCAACA CCGCACGACG GCGCGACATC GAATTGCCGA CGCCGCAGTT CGAGGTGTTC
GAGGGATCGA CGATCGAGGA GCTCGACACG CAGGTGGCGC GGCTGACCGA AGGCGCCGAT
TATTTCATCG CCGACACGCC GGGCCGCGAC GATGTCTTCG CCCGCCACCT TGCAACCACC
GCCGACACGC TCGTCACGCC GATCAACGAC AGCTTCATCG ATTTCGACCT GATCGGCCAG
GTCGATCCCG AGACATTTCA GGTGACGCGC CCCAGCTTTT ATTCGGAGCT GATCTGGGAC
ACGCGCAAGG CGCGCGCCAA GAGCGACGGG CGCACGATCG ACTGGATCAT CCTGCGCAAC
CGCCTCCAGC ATGTCGACGC GCACAATATG CGGCGCGTCG GCGAGGCGCT GGGCCAGTTG
TCGCGCCGCG TCGGCTTTCG CGTCATCCCC GGCCTTGGCG AGCGCGTCAT CTATCGCGAA
CTCTTCCCGG CCGGGCTTAC GCTCCTCGAC AAGGCGCATC TGGGCGGCAT GGGAATCGGC
CATGTCGTCG CGCGGCAGGA ATTGCGCGAG GCGATGGGCG GCCTCAACCT GCCCGCGCGC
GAGCGACTGC ATCCCGACGG CGACCTGTTT GCTGCCGCCT GA
|
|---|
| Protein sequence | MISFRASVAH AAPTGKSQRP MTNSATTPAP HRIIFANEKG GTGKSTCAVH FAVALASQGW
RVAGIDLDPR QRTFHRYLEN RTNTARRRDI ELPTPQFEVF EGSTIEELDT QVARLTEGAD
YFIADTPGRD DVFARHLATT ADTLVTPIND SFIDFDLIGQ VDPETFQVTR PSFYSELIWD
TRKARAKSDG RTIDWIILRN RLQHVDAHNM RRVGEALGQL SRRVGFRVIP GLGERVIYRE
LFPAGLTLLD KAHLGGMGIG HVVARQELRE AMGGLNLPAR ERLHPDGDLF AAA
|
|---|
| |