Gene Sala_2988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2988 
Symbol 
ID4083071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3130758 
End bp3131279 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID638011373 
Productsingle-strand binding protein 
Protein accessionYP_618026 
Protein GI103488465 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0391895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCA GCGTCAACAA GGTAATTCTC ATCGGCAACC TCGGCGCCGA TCCCGAAATC 
AAGTCGTTCC AGAATGGCGG CAAGATCGCC AACATCCGCA TCGCGACATC CGAACAGTGG
AAGGACCGGA TGACCGGCGA GCGCAAGGAG CGCACCGAAT GGCATAATGT CGTGATCAAC
GGCGAAGGGC TGGTCGGCGT CGTCGAACGC TATCTCAAGA AGGGCAGCAA GGTTTATGTC
GAGGGCAGCC TGCGCACCCG CAAGTGGCAG GACCGCGACG GCAACGACCG TTATACGACC
GAAGTGGTGA TTGCCGGCAT GGGCGGCAAT CTGACGATGC TCGACGGCGC GCCCGGTGGC
GGCGCGCGCG GTGGCGGCGG CGATAGCTGG AATCAGGGCG GCGGTTCGAG CGGCGGCTGG
GATCAGGGGG GCAGCGGCGG CGGCGGTTCG GGCGGCGGCG GCGCGCCGGG TGGCGGACGC
CCGCCGTTCG ACGATGATCT GGACGATGAC GTCCCATTCT GA
 
Protein sequence
MAGSVNKVIL IGNLGADPEI KSFQNGGKIA NIRIATSEQW KDRMTGERKE RTEWHNVVIN 
GEGLVGVVER YLKKGSKVYV EGSLRTRKWQ DRDGNDRYTT EVVIAGMGGN LTMLDGAPGG
GARGGGGDSW NQGGGSSGGW DQGGSGGGGS GGGGAPGGGR PPFDDDLDDD VPF