Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2988 |
Symbol | |
ID | 4083071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3130758 |
End bp | 3131279 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638011373 |
Product | single-strand binding protein |
Protein accession | YP_618026 |
Protein GI | 103488465 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0391895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGCA GCGTCAACAA GGTAATTCTC ATCGGCAACC TCGGCGCCGA TCCCGAAATC AAGTCGTTCC AGAATGGCGG CAAGATCGCC AACATCCGCA TCGCGACATC CGAACAGTGG AAGGACCGGA TGACCGGCGA GCGCAAGGAG CGCACCGAAT GGCATAATGT CGTGATCAAC GGCGAAGGGC TGGTCGGCGT CGTCGAACGC TATCTCAAGA AGGGCAGCAA GGTTTATGTC GAGGGCAGCC TGCGCACCCG CAAGTGGCAG GACCGCGACG GCAACGACCG TTATACGACC GAAGTGGTGA TTGCCGGCAT GGGCGGCAAT CTGACGATGC TCGACGGCGC GCCCGGTGGC GGCGCGCGCG GTGGCGGCGG CGATAGCTGG AATCAGGGCG GCGGTTCGAG CGGCGGCTGG GATCAGGGGG GCAGCGGCGG CGGCGGTTCG GGCGGCGGCG GCGCGCCGGG TGGCGGACGC CCGCCGTTCG ACGATGATCT GGACGATGAC GTCCCATTCT GA
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Protein sequence | MAGSVNKVIL IGNLGADPEI KSFQNGGKIA NIRIATSEQW KDRMTGERKE RTEWHNVVIN GEGLVGVVER YLKKGSKVYV EGSLRTRKWQ DRDGNDRYTT EVVIAGMGGN LTMLDGAPGG GARGGGGDSW NQGGGSSGGW DQGGSGGGGS GGGGAPGGGR PPFDDDLDDD VPF
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