Gene Sala_2987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2987 
Symbol 
ID4083070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3128865 
End bp3130724 
Gene Length1860 bp 
Protein Length619 aa 
Translation table11 
GC content67% 
IMG OID638011372 
Productferrous iron transport protein B 
Protein accessionYP_618025 
Protein GI103488464 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0512994 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCATCCCCTC GATCGCGCTC GTCGGCAATC CCAATGCCGG GAAATCGAGC 
CTGTTCAACG CGCTCACCGG CGCGCGGCAA AAGATCGCCA ACTATCCCGG CGTCACCGTC
GAGCGGAAGG CGGGCCATGC GAGTTTCGCC GACGGCCGCC CGCTGTCGCT GATCGACCTG
CCGGGCACCT ACAGCCTCAC CCCCGCGAGT CTCGACGAGG CGGTGACGCG CGACGTGATT
CTGGGCAGGC AGGCGGGCGA GACGCGCCCC GATGCGCTGA TCGTCGTGCT CGACGCCGCC
AACCTCGACA ATCATCTCTG CTTCGCGCTC GAACTGCTCG CGCTCGACCT GCCGACGGTC
GTGGCTCTCA ACATGGTCGA TCTCGCGGAG CGCGACGGGC TGACGCTCGA TCCCGAACGC
CTGTCGCACG AGCTGGGCGT GCCCGTCGTG CCGACGGTCG CGGTGCGCAA GCGCGGTCTG
GCCGATCTGC TTGCCGCGGT CGATGCCGCA ATCCGCTCGC ACCAGCCGCG CGAGGCGGCC
GCCGGACCGG CGAACGACAG CGCGCTTCAC CAGCGCGCGC GCGCGATCGC CCGCGCCGCG
ATCGTCAGCG AAACGCCGGT GCGCCGCTGG ACGCAGCGCG TCGACAATGT GGTGCTGCAC
CCGGTGTTCG GCATGATCAT CCTGCTCGCG CTGATGTTCG TGATGTTCCA GGCGGTCTAC
GCTTGGGCCG GACCGCCCGC CGACGCGCTC GAAGCGCTGG TTGGCGCGGC TCAGGCGTGG
GTTGTCGATA ATGTCCCGCA GAACCTCCTC CGCGATCTGG TGGTCGAGGG ACTGCTCGCG
GGCGTCGGGG CGGTCGTCGT TTTCCTGCCG CAGATCCTGA TTCTCTTCCT CTTCATCCTG
CTTCTGGAGG CGTCGGGCTA TATGACGCGC GCGGCCTTTC TGATGGACGG GCTGATGGGC
AAGGTCGGAT TGTCGGGGCG CGGTTTCATC CCGCTCCTCT CCAGCTTTGC CTGCGCCGTG
CCCGGCATCA TGGCGACGCG CGCGATCCCC GACGAGAAGG ACCGGCTGAC GACGATCCTG
ATCGCGCCGT TGATGACCTG TTCGGCGCGG CTTCCGGTCT ATGCGCTGAT CATCGCCGCC
TTCATCCCCG ACAGCGGGGT CGGCGGCACC GGCATCGGGC TTCAGGGTCT GGTGCTTTTC
GGCCTTTATG TCGCCGGGAT CGTCGGCGCG CTTGTCGTCG CCTTCGCGCT GCGCCGCACG
GTGGCCAGGG GCACGGGCGC GGGCTTCATG ATGGAAATGC CGCGATACCA GATGCCGCGG
CTGCGCGACG TCGCGCTCGG CCTGTGGCAG CGCGCGTGGA TCTTTCTGCG CCGCGCGGGC
ACGATCATCG CGTTCACGAC AGTCATTTTG TGGCTGCTTC TCACCTTTCC CAAGGCGCCC
GAGGGGCAGA GCCAGGTCGA TTATAGCATC GCCGGCCGCA TCGCGAGCGG GCTGGAGGTC
GCCGTCACGC CGATCGGGTT CAACCACGAC ATCGCGCTCG CGCTCATCCC CGCGATGGCG
GCGCGCGAGG TCGCGGTGTC GGCGATGGCG ACGGCGAATG CGATCGATGC CGATGGCGAC
GAGGAGGCGA TGGCGCAGAC GCTCGGCGAA CGATTGCAGG GCAAGTGGAG CCTCGCCACC
GCGCTCGCCT TCCTCGCCTG GTTCGTCTTT GCGCCGCAGT GCATTTCGAC GATCGCGATC
ACGCGGCGAG AGACGAACGG ATGGAAATGG CCGCTGTTCA TGGTTGGCTA TTTGTTTGCG
CTCGCCTATG CCGCTGCTGG TATCACATAC TGGACAGCCG TTGCCTTTGG CCTAGGCTGA
 
Protein sequence
MTAAIPSIAL VGNPNAGKSS LFNALTGARQ KIANYPGVTV ERKAGHASFA DGRPLSLIDL 
PGTYSLTPAS LDEAVTRDVI LGRQAGETRP DALIVVLDAA NLDNHLCFAL ELLALDLPTV
VALNMVDLAE RDGLTLDPER LSHELGVPVV PTVAVRKRGL ADLLAAVDAA IRSHQPREAA
AGPANDSALH QRARAIARAA IVSETPVRRW TQRVDNVVLH PVFGMIILLA LMFVMFQAVY
AWAGPPADAL EALVGAAQAW VVDNVPQNLL RDLVVEGLLA GVGAVVVFLP QILILFLFIL
LLEASGYMTR AAFLMDGLMG KVGLSGRGFI PLLSSFACAV PGIMATRAIP DEKDRLTTIL
IAPLMTCSAR LPVYALIIAA FIPDSGVGGT GIGLQGLVLF GLYVAGIVGA LVVAFALRRT
VARGTGAGFM MEMPRYQMPR LRDVALGLWQ RAWIFLRRAG TIIAFTTVIL WLLLTFPKAP
EGQSQVDYSI AGRIASGLEV AVTPIGFNHD IALALIPAMA AREVAVSAMA TANAIDADGD
EEAMAQTLGE RLQGKWSLAT ALAFLAWFVF APQCISTIAI TRRETNGWKW PLFMVGYLFA
LAYAAAGITY WTAVAFGLG