Gene Sala_2984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2984 
Symbol 
ID4083067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3126615 
End bp3127700 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content68% 
IMG OID638011369 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_618022 
Protein GI103488461 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.167784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0406088 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CGCTGTTCCA GCCGATCACG CTGGGCGCCA TCGAAGCGCC GAACCGCATC 
ATCATGGCGC CGCTGACGCG CGGCCGCGCG GGACCGGGCT TCGTTCCCAA TGAGCTCGCG
CGCGAATATT ATCGCCAGCG CGCCTCGGCG GGGCTGATCA TTTCGGAAGC GACGGGGATT
TCGCAGGAGG GGCTCGGCTG GCCGAATGCG CCGGGCCTGT GGACCGATGC GCAGGTCGAA
GGCTGGAAGC CGGTGACCGA AGCCGTCCAT GAGGCGGGGG GCCGCATCGT TGCCCAGCTC
TGGCATATGG GCCGCGTCGT CCATTCGGTG TTCAACGACG GCAAACCACC CGTCTCGGCT
TCGGCGACGC GGGCGCCAGG CAAGGCGCAC ACCCCGGTCG GCCGCCTCGA ATATGAAGTT
GCGCGCCCGC TCGAACCGGG CGAAATCCCG CGCGTCATCG CCGATTATGC GAAGGCCGCC
GAAAATGCGA AGCGCGCCGG TTTCGACGGC GTCCAGCTGC ACGGCGCAAA CGGTTATCTG
ATCGACCAGT TCCTGCGCGA CAATTCAAAT CTGCGCGACG ATGATTATGG CGGCCCGGTC
GAAAACCGCA TCCGCCTGCT CCGCGAAGTG ACCGAAGCGC TGATCTCGGT CTGGGGCGCC
GACCGCGTCG GTGTGCGTCT CTCGCCCAAT GGCGATACGC AGGGCGTCGA CGACAGCGCG
CCCGAAAGGC TGTTCCCGAT CGCCGCGGCG GCGCTCGACG CGCTCGGCAT CGCCTTCCTC
GAGTTGCGCG AGCCCGGCCC CGACGGCACA TTCGGCAGAA CGGATGTGCC CAAGCAGTCG
CCGTCGATCC GCGCCGCGTT CAGGGGCCCG CTGATCCTCA ACAGCGACTA CACCGCCGCG
CTCGCCGACG AAGCGATCGC CAGCGGCATC GCCGACGCGA TCGCCTTCGG GCGGCCCTTC
ATCGCCAATC CCGACCTCGT CGAGCGCATC CGCACCGGCG CCGAATGGGC CGCCGACAAT
CCGCAGACCT GGTATTCGCC GGGGCCCGAA GGTTACATCG ATTATCCGGT ACTGGAGGCG
GCCTGA
 
Protein sequence
MTASLFQPIT LGAIEAPNRI IMAPLTRGRA GPGFVPNELA REYYRQRASA GLIISEATGI 
SQEGLGWPNA PGLWTDAQVE GWKPVTEAVH EAGGRIVAQL WHMGRVVHSV FNDGKPPVSA
SATRAPGKAH TPVGRLEYEV ARPLEPGEIP RVIADYAKAA ENAKRAGFDG VQLHGANGYL
IDQFLRDNSN LRDDDYGGPV ENRIRLLREV TEALISVWGA DRVGVRLSPN GDTQGVDDSA
PERLFPIAAA ALDALGIAFL ELREPGPDGT FGRTDVPKQS PSIRAAFRGP LILNSDYTAA
LADEAIASGI ADAIAFGRPF IANPDLVERI RTGAEWAADN PQTWYSPGPE GYIDYPVLEA
A