Gene Sala_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2982 
SymbolribH 
ID4083065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand+ 
Start bp3125493 
End bp3125918 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content64% 
IMG OID638011367 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_618020 
Protein GI103488459 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.34284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.0382606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCACG TCCTGATCGT CGAAGCGCGT TTCTACAGCC ATTTGAACGA CATGCTGCTC 
GATGGCGTGC GCAGCGCGCT CGATGCCGAA GGGCATAGCC ATGAAACGGT GACCGTCCCC 
GGCGCGCTCG AAGTGCCCGC GGCGATCGCG CTCGCCGCCG ATAGCGGACG CTTCGACGCC 
TATGTCGCGC TCGGCGTGGT GATCCGCGGC GAAACCTATC ATTTCGAGGT CGTCTCGAAC 
GAAAGCGCGC GCGGCATCAT GGCATTGACA CTCGACGGGC TCGCGATCGG CAACGGCATC 
CTCACTGTCG AGAATGAAGA ACAGGCGCTT GCGCGCGCCG ACAAGACGCG CAAGGATAAG 
GGCGGCGAGG CGGCGAAGGC CGCGCTCGCG ATGCTCGCGC TCAAGGAACA ATTCGGTATT 
GGTTGA
 
Protein sequence
MAHVLIVEAR FYSHLNDMLL DGVRSALDAE GHSHETVTVP GALEVPAAIA LAADSGRFDA 
YVALGVVIRG ETYHFEVVSN ESARGIMALT LDGLAIGNGI LTVENEEQAL ARADKTRKDK 
GGEAAKAALA MLALKEQFGI G