| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2979 |
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| Symbol | |
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| ID | 4083062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3122801 |
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| End bp | 3123448 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011364 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_618017 |
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| Protein GI | 103488456 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.565267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0354023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG TCGCAAATAT GGGGCAAAGG ATCGTCCGTG CAAGTCTGAT CCTCGTTTTC
GGCGCCGCGC TGGCGGGCTG CGACGGCAGC GGCGGCAGCG CCGCGCCCGC CCGGCCGCCG
CTCGAAGGCG CGCGGATCGG CGGCCCGTTC ACGCTGACCG ACCAGAATGG CCGCACCGTC
CGCGACAGCG ATTTTGCCGG CCGCTATCGC CTCATCTATT TCGGCTACAG CTTCTGCCCC
GATATCTGCC CGGTCGACCT GCAAAAGCTG ATGCGCGGCC TCGCCCGGTT CGAAAAGACC
GATGCCGCGC GCGGCGCCAG GGTCGCGCCG CTCTTCATCA CCGTCGACCC CGCGCGCGAC
ACGCCCGAAG CGCTCAAACC CTTTGTCGCG CGCTATCACC CGCGCCTGCT CGGCCTGACC
GGCACGCCCG AACAGATCGC CGCGGCCGCC AAAGCCTTTG TCGTCACCTA TAACAAGGTG
CCGGGATCGG CCCCCGACCG CTATCTGATG GCGCACAGCC AGCTCGCCTT CCTGATGGGT
CCCGACGGCA AGCCGCTCGC GCTGCTGCCG CTCGACGACC CGACGACCGA TCCCGACGAG
GGTGCGCCCA CCAAGGTCGC CGCCGAACTG GCCAAGTGGG TCAAATAG
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| Protein sequence | MMNVANMGQR IVRASLILVF GAALAGCDGS GGSAAPARPP LEGARIGGPF TLTDQNGRTV
RDSDFAGRYR LIYFGYSFCP DICPVDLQKL MRGLARFEKT DAARGARVAP LFITVDPARD
TPEALKPFVA RYHPRLLGLT GTPEQIAAAA KAFVVTYNKV PGSAPDRYLM AHSQLAFLMG
PDGKPLALLP LDDPTTDPDE GAPTKVAAEL AKWVK
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