Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2973 |
Symbol | |
ID | 4083056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3117794 |
End bp | 3118198 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011358 |
Product | rare lipoprotein A |
Protein accession | YP_618011 |
Protein GI | 103488450 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0691329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGCCT TTTCAGCCAT GCTGCTTCCG CTTCTGCTGA CGGCGTCAGC CGCGGCGCAG GAAGTCCCGA TCGTCGATGA GGCGCTTGCC GAGATCGTAC CGGAAACCGA GATCGTCGGC GGCGTCGCAA GCTATTATGG CAATGAACTT GCGGGCAACC GCACCGCGAG CGGCGAACGC TTCGATCCCG GCCAGCTCAC CGCGGCGCAC CGCACCTTGC CCTTCGGCTC GATGGTGCGC GTCACCAATG TCGCCACCGG CGACAGCGTC GTCGTGCGGA TCAACGACCG CGGACCCTTT GCCCATGGCC GGGTGATCGA CGTCAGCCAC GCCGCCGCGC GCGAAATCGG TCTGCACCGC AGCGGCACCG CGCGCGTGAA ACTGGCGCTG CTCGCCGACG ATTGA
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Protein sequence | MRAFSAMLLP LLLTASAAAQ EVPIVDEALA EIVPETEIVG GVASYYGNEL AGNRTASGER FDPGQLTAAH RTLPFGSMVR VTNVATGDSV VVRINDRGPF AHGRVIDVSH AAAREIGLHR SGTARVKLAL LADD
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