| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2972 |
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| Symbol | |
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| ID | 4081088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3115117 |
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| End bp | 3117693 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011357 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_618010 |
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| Protein GI | 103488449 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0506352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA CCCCCGAGAA CAGCGCGCCC GAAGGCGCCG CAAAACAGCC CAACGCCAAC
GCCTATGGCG CCGATTCGAT CAAGGTATTG AAGGGGCTCG ATGCCGTGCG CAAACGGCCG
GGCATGTATA TCGGCGACAC CGACGACGGG TCGGGGCTGC ATCATATGGT GTTCGAGGTC
AGCGACAATG CGATCGACGA GGCGCTTGCC GGTCATTGCG ACCTCATACT CATCACATTG
AACAGCGACG GGTCGGTCAG CGTCGAGGAT AATGGCCGCG GCATCCCCAC CGACATCCAC
GCCGAAGAGG GCGTGTCGGC CGCCGAAGTC ATCATGACCC AGCTCCACGC GGGCGGGAAG
TTCGAGAATA CCAGCGACGA CAATGCCTAC AAGGTGTCGG GCGGCCTCCA CGGCGTCGGC
GTCAGCGTCG TCAACGCCCT GTCCGAATGG CTCGAACTCA CCATCTGGCG CGACGGGCAG
GAACATTGGA TGCGGTTCGA GCATGGCGAC GCCGTCGCCC CGCTCCGCGT CAACGGCCCC
GCCCCGGCGG GCAAAAAGGG CACGCGCGTC ACCTTCCAGG CGTCGACCGA CACGTTCAAG
AATGTCACCG AGTTCGATTT CGAAAAGCTC GAGCATCGCT ACCGCGAGCT GGCGTTCCTC
AATTCTGGGG TGCGGATCAA GCTCGTCGAC GCGCGCCACG CCGAACATGT CAGCCACGAC
CTCTTCTATG AGGGCGGCAT CGCGGCGTTC GTCAAATATC TCGACCGCAA CAAGACCCCG
CTGCTCCCCG ATCCGATCGC GATCAGCAGC GAGCGCGACG GCATCGGCAT CGACGTCGCA
TTGGAATGGA ACGACAGCTA TTATGAAAAT GTCCTCTGCT TCACGAACAA TATCCCGCAG
CGCGACGGCG GCACGCACCT CGCCGCCTTC CGCGCCGCGC TGACGCGCAC CTTGAACGGC
TATGGCGAAA AGTCGGGACT GCTGAAGAAG GAGAAGGTGT CGCTCACCGG CGAGGATATG
CGCGAAGGGC TGACCGCGAT CGTCTCGGTC AAGCTGCCCG ACCCCAAGTT CAGCTCGCAG
ACCAAGGACA AGCTCGTCTC CTCCGAAGTC CGCCAGCCGC TCGAAAGCCT GATGGCCGAC
CGGATGACCG AATGGCTCGA GGAAAATCCT GCCTATGCGA AGGCGGTGAT CCAGAAGGTC
GTCGATGCCG CCGCGGCGCG CGAGGCCGCG AAAAAGGCGC GCGAGCTCAC CCGGCGCAAG
GGCGCGATGG ACATCGCCTC GCTCCCCGGC AAGCTCGCCG ACTGCCAGGA ACGCGACCCC
GCGAAATGCG AGCTTTTCCT TGTCGAGGGT GACTCGGCAG GCGGCAGTGC GAAGCAGGGC
CGCGACCGGC ATGTGCAGGC GATCCTGCCC TTGAAGGGCA AGATCCTGAA CGTCGAGCGC
GCGCGTTTCG ACCGCATCAT TTCGTCGAAG GAGGTCGGTA CGCTGATCCA GGCGCTCGGC
ACCGGCATCC GCGACGAGTT CAACATTGAA AAACTGCGCT ATCACAAGAT TGTGATCATG
ACCGACGCCG ACGTCGACGG CGCGCATATC CGCACGCTTC TGCTCACCTT CTTCTACCGC
CAGATGCCCG AAATCATCGA GAAGGGGCAT CTCTACATCG CGCAGCCGCC GCTCTATAAG
GTCGCGAAGG GGCGGAGCGA GGTTTACCTG AAAGACGACA GCGCGCTCGA AAACTACCTC
GTCGACGGCG GGATCGATGC GCTGATGCTC GAAACCACCG GCGGCGCGCG GTCGGGCGCC
GATTTGCGCG GACTGATCGA ACATGGGCGC CGTTTGCGCG CGCTGATGCG CTATGTCCCG
CGCGGCCATA ATTATGGGCT GGTCGAGGCG CTGGCGCTGA ACGGCGCCCT CGATCCGGCG
CTCGACAGCG CGGGCCGCAC CGCCGCCGCG GTCCGCGCCG CCGAATGGCT CAACGCCGCC
GAGCGCGCGC TGACCGGCGG CGCCGAGGCG AAATGGACGA TCACGGCCGC GGGCGGCGGC
TACACGCTCG AAAAGCGCTG GCGCGGGGTC AGCGACCATC ATGCGATCGA CGCGGCCTTC
CTCGCGAGCC AGGAGGCGCG TCGGCTGCAC ACGCTTGCCG CGGAACAGGC CGAAACCTAT
GCGCACCCGG CGCGGCTGGT AAAGGGCAGC AGCGCCGCGG CGCTCGCCGC CGACGCCGCC
GCGCTCGCCG CGACCGAGGC AGCCGAGGAC GATGCCGAAG CGAGCGACGG CGACCTGCCC
GCCGCGACCG CCCGCAAGGT CACGCCGATC ACGCGTCCGT CCGAACTGCT CGAGGCGATC
TTCGCGCACA GCCGCAAGGG CCTCGCGATC AGCCGCTACA AGGGGCTGGG CGAGATGAAT
GCCGAACAGC TTTGGGAAAC GACGCTCGAT CCCTCGAACC GTTCGCTGCT GCGCGTCGAG
GCCGAACAGG CCGACATTGC GCACGAAATC TTCGAACGAT TGATGGGCGA CGAGGTCGAA
CCGCGCCGCG ATTTCATCCA GACCAACGCG CTGTCGGTGG CGAATCTCGA CGTCTGA
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| Protein sequence | MTDTPENSAP EGAAKQPNAN AYGADSIKVL KGLDAVRKRP GMYIGDTDDG SGLHHMVFEV
SDNAIDEALA GHCDLILITL NSDGSVSVED NGRGIPTDIH AEEGVSAAEV IMTQLHAGGK
FENTSDDNAY KVSGGLHGVG VSVVNALSEW LELTIWRDGQ EHWMRFEHGD AVAPLRVNGP
APAGKKGTRV TFQASTDTFK NVTEFDFEKL EHRYRELAFL NSGVRIKLVD ARHAEHVSHD
LFYEGGIAAF VKYLDRNKTP LLPDPIAISS ERDGIGIDVA LEWNDSYYEN VLCFTNNIPQ
RDGGTHLAAF RAALTRTLNG YGEKSGLLKK EKVSLTGEDM REGLTAIVSV KLPDPKFSSQ
TKDKLVSSEV RQPLESLMAD RMTEWLEENP AYAKAVIQKV VDAAAAREAA KKARELTRRK
GAMDIASLPG KLADCQERDP AKCELFLVEG DSAGGSAKQG RDRHVQAILP LKGKILNVER
ARFDRIISSK EVGTLIQALG TGIRDEFNIE KLRYHKIVIM TDADVDGAHI RTLLLTFFYR
QMPEIIEKGH LYIAQPPLYK VAKGRSEVYL KDDSALENYL VDGGIDALML ETTGGARSGA
DLRGLIEHGR RLRALMRYVP RGHNYGLVEA LALNGALDPA LDSAGRTAAA VRAAEWLNAA
ERALTGGAEA KWTITAAGGG YTLEKRWRGV SDHHAIDAAF LASQEARRLH TLAAEQAETY
AHPARLVKGS SAAALAADAA ALAATEAAED DAEASDGDLP AATARKVTPI TRPSELLEAI
FAHSRKGLAI SRYKGLGEMN AEQLWETTLD PSNRSLLRVE AEQADIAHEI FERLMGDEVE
PRRDFIQTNA LSVANLDV
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