| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2955 |
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| Symbol | |
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| ID | 4081071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3097826 |
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| End bp | 3099160 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011340 |
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| Product | general substrate transporter |
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| Protein accession | YP_617993 |
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| Protein GI | 103488432 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00217924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0672974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA CGCTGCCCCC CCACGCCCCC GGCCATCCGC CGCCGTTTCG CGAACCATCG
CCGCTCCACC GCGCGGTCGG CGCCTCGGCG CTCGGCAATG CGGTCGAATG GTTCGACTAT
GGCATCTATG CCTATGGCGT GACCTATATC TCGGCGGCGC TCTTTCCCGG CGAGACCGAG
GAGGCGGTGC TGTTCGCGCT CGCGACCTTT GCCATCTCCT TCCTCGTGCG ACCGCTCGGC
GGGCTGTTCT GGGGCCCGCT TGGCGACCGC ATCGGGCGGA AATCGGTGCT CGCGATGACG
ATCCTCTTGA TGGCGGGCGC GACCTTTGCC GTCGGACTCA TCCCGTCCTA TGACAGCATC
GGCTTCTGGG CGCCGACCCT GCTCATCATC CTGCGCATGG TGCAGGGTTT TTCGACCGGC
GGCGAATATG GCGGTGCGGC GACCTTCATG GCCGAATATG CGCCCGACCA CCGGCGCGGC
TTCTATGGCA GCTTCCTCGA GTTCGGGACG CTCGCGGGCT TTTCCTTCGG CGCGGCGCTG
ATGCTCGGCT ATTCGCTCTA TCTGGGCGAT GCGGCGATGC ACGAATGGGG CTGGCGCATC
CCCTTCCTCA TCGCCGGGCC GATCGGCCTC ATCGGCATGT ATGTGCGCTC GAAGATGGAG
GATACGCCAG TGTTCCGCGC GGAAATGGCG TCGGCCGAGC GGCGCGAACC GCCGGGACTG
CTTGCGCTGA TGCGCGATTA CTGGCGCCCC TTGCTCGTCG TCGGCGGCCT GGTGGTGGCG
CTCAACGTCG TCAACTATTC GCTGCTCAGC TACATGCCCA CCTATCTTCA GCGGCGCATC
GGCCTGTCGA GCGAGGAAGC GCTGCTCGTG CCGATCATCG GCATGGTCTT CATGATGTGC
TTCCTGCCCT TCGCCGGCGC GCTGTCGGAC CGGATCGGGC GGCGGCCGAT GTGGCGCTGG
TCGCTGATCG GCCTCTTCCT GCTCGTCGTG CCGCTCTACA TGCTCATCGG CACGGGCTTT
GCGGGGGCGA TCGTCGCCTT CATGGCGCTC GGCCTTCTCT ATGTGCCGCA GCTCGCGACG
ATCTCGGCGA CCTTTCCCGC GATGTTCCCG ACCGCGGTGC GCTTCGCGGG CTTTGCCATC
GCCTATAATA TCTCCACCTC GATCTTCGGT GGCACCGCGC CGATGATCGG CAGCGGCCTG
ATCAGTCTGA CCGGCGATCC GCTGATGCCC GCCTATTATA TGATGCTCGC CTGCCTCGTC
GGGCTGGTTG CGCTCCGTTT CATGCCCGAA ACCGCGGGGC GTTCGCTGCT CGAAGACCCG
TTCCGGCGGG ATTGA
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| Protein sequence | MDKTLPPHAP GHPPPFREPS PLHRAVGASA LGNAVEWFDY GIYAYGVTYI SAALFPGETE
EAVLFALATF AISFLVRPLG GLFWGPLGDR IGRKSVLAMT ILLMAGATFA VGLIPSYDSI
GFWAPTLLII LRMVQGFSTG GEYGGAATFM AEYAPDHRRG FYGSFLEFGT LAGFSFGAAL
MLGYSLYLGD AAMHEWGWRI PFLIAGPIGL IGMYVRSKME DTPVFRAEMA SAERREPPGL
LALMRDYWRP LLVVGGLVVA LNVVNYSLLS YMPTYLQRRI GLSSEEALLV PIIGMVFMMC
FLPFAGALSD RIGRRPMWRW SLIGLFLLVV PLYMLIGTGF AGAIVAFMAL GLLYVPQLAT
ISATFPAMFP TAVRFAGFAI AYNISTSIFG GTAPMIGSGL ISLTGDPLMP AYYMMLACLV
GLVALRFMPE TAGRSLLEDP FRRD
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