Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2950 |
Symbol | |
ID | 4080992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3092431 |
End bp | 3093738 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638011335 |
Product | diaminobutyrate--2-oxoglutarate aminotransferase |
Protein accession | YP_617988 |
Protein GI | 103488427 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases [TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.860065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA CGACACCGCA ACCGTCCGGC AACCTTCCGG ATCGGAGCAT TTATGAACGC CGCGAATCGG CGGTGCGCAG CTACGCCCGG TCGATGCCGC GCCAATTCGG TAAAGCGCAG GGCGTGTGGA TGCACGATGA TCAGGGCGGG CGTTATCTCG ACTTCCTGTC GGGCTGTTCG ACGCTGAACT ATGGCCACAA CCATCCGATT TTGAAACAGG CGCTGCTCGA CTATATCGCC GCCGACGGCA TCGCCCACGG GCTCGACCTG CACACCGATG CAAAGCAGGA CTTTCTCGAC ACGTTCGAGG AAGTGATCCT GAAACCGCGC GGGCTCGACC ACCGCGTGAT GTTCACCGGC CCGACCGGCA CCAACGCTGT CGAGGCCGCG ATCAAGCTCG CGCGCAAGGT GACGGGCCGC GAAATGGTGA TCGCCTTTAC CAACGGCTTT CACGGCATGA CGTTGGGCGC GCTCGCCTGC ACCGGCAATG CGACCAAGCG CGGCGGCGCG GGCGTACCGC TGAGCCACGT CGCGCACGAA CCCTATTATG ATTATTACGG TCCCGAGGTC GATACCGCCG AATTGCTCGA ACAACGGCTC GCCGACCCGT CGAGCGGGCT CGACGCGCCC GCGGCGATCC TCGTCGAAAC GGTGCAGGGT GAGGGCGGGC TCAATGCCGC CTCGGCCGAA TGGCTGCGCC GCATCGCGGG AATCGCGAAG GCGCATGGCG CGCTGCTGAT CGTCGACGAC ATCCAGGCGG GTTGCGGCCG CACCGGCACC TTCTTCAGCT TCGAGGATAT GGGCTTCACC CCCGATATCG TGACGCTGGC GAAGTCGCTG TCGGGCATGG GCCTGCCCTT TGCGCTGACC CTGCTGCGTC CCGAGCTCGA CCAATGGTCG CCGGGCGAGC ATAACGGCAC CTTCCGCGGC AACAACCATG CCTTTGTCAC CGCGACCGCC GCGCTCCGCC ATTTCTGGAG CGCCGACGAT TTCCAGCGCG ACATAGGCCG CCGCGCCGCC CTGCTCGAAA CCCGCCTCGC GCGCATCGCC GCCGAACATG GGTTCGAGGT GCGCGGGCGC GGCATGATGC GCGGCGTCAA TGTCGGCTCG GGCGAGCTCG CCGCGACCGT CACCGCCGCC TGCTTCGACG CCGGGCTGAT CATCGAGACC AGCGGCGCGC ACGACGAGGT GATCAAGGTG CTCGCCCCGC TCGTCATCGA CGATGCGGTG CTCGGTGCCG GCCTCGACAT CCTCGAAAGC AAGATCCGCG AGGCGATGGC CACCGATTAC GCCGTCGCCG CCGAATAA
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Protein sequence | MMITTPQPSG NLPDRSIYER RESAVRSYAR SMPRQFGKAQ GVWMHDDQGG RYLDFLSGCS TLNYGHNHPI LKQALLDYIA ADGIAHGLDL HTDAKQDFLD TFEEVILKPR GLDHRVMFTG PTGTNAVEAA IKLARKVTGR EMVIAFTNGF HGMTLGALAC TGNATKRGGA GVPLSHVAHE PYYDYYGPEV DTAELLEQRL ADPSSGLDAP AAILVETVQG EGGLNAASAE WLRRIAGIAK AHGALLIVDD IQAGCGRTGT FFSFEDMGFT PDIVTLAKSL SGMGLPFALT LLRPELDQWS PGEHNGTFRG NNHAFVTATA ALRHFWSADD FQRDIGRRAA LLETRLARIA AEHGFEVRGR GMMRGVNVGS GELAATVTAA CFDAGLIIET SGAHDEVIKV LAPLVIDDAV LGAGLDILES KIREAMATDY AVAAE
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