| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2946 |
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| Symbol | |
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| ID | 4080988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3089940 |
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| End bp | 3090668 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011331 |
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| Product | TonB-like protein |
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| Protein accession | YP_617984 |
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| Protein GI | 103488423 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA TACCCCTGAT TTCGGCGATA ATGACCGCTC CCGAAGCGAC CACCGCGCCC
GCGGGTCGTT CAGCGACCTT GTCCCGCGCC GTCTATGGCA GCGATCACCG CCGCCATCCG
GTCGCGGCGC TTCTCGCGGT CGGGCTGCCT GCCGCGCTCG TCGCCGCGGT GGCGCTGTCG
CCGATGATCG TCGAAACGCC GCCAAAGTCC GAACCGATCA CCGGCACACT GATCGACCTG
CCCAAACCGC CGCCGCCGCC CGAACCGGCC CAGGATGCGA AACCGACGCC GAAAACCGCG
TCGGCGACCG AAAGCGTTCA GCCGCGCGTC GAAACCGTGC CGCTGAATGG CGACCGCGTC
GTCGTCGGGC CCGTAATCCC CGACGCACGG CCGCTCGATC GCGGCCCGCC GGTCGTTCCC
GTCGATCCGC CCACGCCGAA GCTGGTGCTT GCCGAACTCG ACGCGCGCTT TGCCGGGGCG
TTCCAGCCCG ATTATCCGGC GCGCGAGCAG CGGCGCGGGG TCGAGGGGGT TGTGAAGGTG
CGCGTGCTCA TCGGCACCGA TGGCCGCGTG AAGGCGGTCG AGCTGGTCAG CACCGACAGT
CCGGGCTTCT TTGAAGAGAC GAAGCGGCGC GCGCTTGCCA AATGGCGCTT CAGGCCCGCG
ACGCGCGGCG GCGTGGCGGA GGAAAGCTGG AAGGTGATGA CCGTGCGCTT TGAAATCAGG
AACGGCTGA
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| Protein sequence | MTLIPLISAI MTAPEATTAP AGRSATLSRA VYGSDHRRHP VAALLAVGLP AALVAAVALS
PMIVETPPKS EPITGTLIDL PKPPPPPEPA QDAKPTPKTA SATESVQPRV ETVPLNGDRV
VVGPVIPDAR PLDRGPPVVP VDPPTPKLVL AELDARFAGA FQPDYPAREQ RRGVEGVVKV
RVLIGTDGRV KAVELVSTDS PGFFEETKRR ALAKWRFRPA TRGGVAEESW KVMTVRFEIR
NG
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