| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2942 |
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| Symbol | |
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| ID | 4080984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3085178 |
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| End bp | 3086113 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011327 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_617980 |
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| Protein GI | 103488419 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.851382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTCA TCTCCGGCAA CAGCAACCTG CCGCTGGCCC GCGCGATCGC CGATTATCTC
GAGCTGCCGC TGACCGACAC CAGCGTGCGC CGCTTCGCCG ACGAAGAGGT TTTCGTCGAA
ATCCACGAAA ATGTCCGCGG GCAGGATGTT TTCGTCGTTC AGCCGACCAA TTTCCCCGCG
AACGACAATC TGATGGAATT GCTCATCATC AACGACGCGC TGCGCCGCGC GTCGGCGAAG
CGCATCACCG CGGTCGTTCC CTATTTCGGC TATGCGCGGC AGGATCGCAA ACCCGGCCCG
CGCACGCCGA TCTCGGCAAA GCTGGTCGCG AACCTCATCA CCACCTCGGG CGCCGACCGC
GTGCTCGCGA TCGACCTGCA CGCCGGGCAG ATCCAGGGCT TCTTCGACAT CCCGACCGAC
AATCTCTATG CCGCGCCGGT GATGAGCGCC GACATCCAGG CGCGCTTCGG CGACAAGAAT
CTGATGGTCG TGTCGCCCGA CGTCGGCGGC GTCGTGCGCG CCCGCGCGCT CGCCAAGCGG
CTCGACAACG CGCCGCTCGC CATCGTCGAC AAGCGCCGCG AGCGCGCGGG CGAATCGGAA
GTGATGAACA TCATCGGCGA CGTCGCGGGT CGCTTCTGCA TCCTCATCGA CGATATCGTC
GATTCGGCGG GAACGCTGTG CAATGCCGCC GGGGCGCTGA AGGCCGCAGG CGCCGAAGGC
GTCGTCGCCT ATTGCACCCA TGGCGTGCTG TCGGGCGGCG CCGTCGCCCG CGTCAATGCG
AGCGAGCTCA CCGAACTCGT CATCACCGAT TCGATCCAGC CGACCGACGC GGTGAACGAC
AGCGCCAAGG TTCGCACGCT TACCGTCGCG CCGCTGCTCG GCGAGGCGAT CAAGCGGATT
GCCGACGAAA CGAGCGTCTC CTCGCTCTTT GACTGA
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| Protein sequence | MKLISGNSNL PLARAIADYL ELPLTDTSVR RFADEEVFVE IHENVRGQDV FVVQPTNFPA
NDNLMELLII NDALRRASAK RITAVVPYFG YARQDRKPGP RTPISAKLVA NLITTSGADR
VLAIDLHAGQ IQGFFDIPTD NLYAAPVMSA DIQARFGDKN LMVVSPDVGG VVRARALAKR
LDNAPLAIVD KRRERAGESE VMNIIGDVAG RFCILIDDIV DSAGTLCNAA GALKAAGAEG
VVAYCTHGVL SGGAVARVNA SELTELVITD SIQPTDAVND SAKVRTLTVA PLLGEAIKRI
ADETSVSSLF D
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