| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2939 |
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| Symbol | rplT |
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| ID | 4080981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3083620 |
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| End bp | 3083985 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638011324 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_617977 |
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| Protein GI | 103488416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.774249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACGCA TCAAACGCGG CACGACGACG CGCGCCAAGC ACAAGCGGAT TCTGGACCAG
GCGAAGGGCT ATTATGGCCG TCGCAAGAAT ACGATCCGCA TCGCCAGGCA GGCGGTGGAA
AAGGCCGGCC AATATGCCTA TCGCGACCGC AAGGTAAAGA AGCGGAGCTT CCGCGCCCTG
TGGATCCAGC GCATCAACGC CGCGGTCCGC GCCGAAGGCC TCACCTATTC GCAGTTCATG
CACGGGGTGA AGCTCGCCGG AATCGAACTC GACCGCAAGG TCATGGCCGA CCTTGCCATG
AACGAAGGCG GCGTGTTCAC CGCGATCGTC GCGCAGGCGA AGGCGGCGCT GCCCAAGGCG
GCCTGA
|
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| Protein sequence | MSRIKRGTTT RAKHKRILDQ AKGYYGRRKN TIRIARQAVE KAGQYAYRDR KVKKRSFRAL
WIQRINAAVR AEGLTYSQFM HGVKLAGIEL DRKVMADLAM NEGGVFTAIV AQAKAALPKA
A
|
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