Gene Sala_2938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2938 
Symbol 
ID4080980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3082603 
End bp3083421 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content65% 
IMG OID638011323 
Productflagellin-like protein 
Protein accessionYP_617976 
Protein GI103488415 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.843721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA TCAACACCAA TGTGAGCGCG CTGCGCGCCC AGAATAATTC GCGTGTCGCG 
AGCCAAATGC AGTCGCAGGC GATGGAACGC CTGTCGAGCG GCAAGCGCAT CAACGCTGCG
AAAGACGATG CCGCCGGCCT CGCCATCGCG ACCCGCATGG ACGCGACCGC GCGCGGCCTG
ACCCAGGCGA TCCGCAACGC CAACGACGGC ATTTCGCTGG CGCAGACCGC CGACAGCGCC
GCCGGCAGCA TTTCGGACAT TCTCGTCCGT ATGCGCGAAC TGGCGGTTCA GTCGGCGAAC
GGCACCAACG GGACGACCGA TCGCGCGGCG CTCCAGACCG AAGTCACCGC CCTGATCTCG
CAGATCGGCG ACATCGCAAC GCGCACCGAG TTCAACGGCA ATGTGCTGCT CGACGGCAGT
GCCGCCACCG GTTTCGATAT CCAGACGGGC ATCAATTCCG GCGACGTCGT GAACATCACG
ATCGCCGATA TGCAGGCCAC CGCGCTCGGC GTCGGCACGC TCGACATTTC GACTGCGGCG
GGCGCGTCGG GCGCGCTGGC AACGCTCGAC ACGGCGATCC AGACGGTCGC GACGCAGCGC
GCCAACCTTG GTGCCCAGCA GAACCGCCTG ACCTCGGCCG TCGATAATTT GACGTCGACC
GTCACGAATC TGGCAGAATC GAAGTCGCGG ATCGAGGATG CCGACTTCTC GGTCGAATCG
ACGAACCTCG CCGCCGCTGG CATCCTTGCC CAGGCATCGA CCGCGATGCT TGCCCAGGCG
AACCAGAGCA CGCAGGGCGT GATGAACCTG CTCCGCTAA
 
Protein sequence
MTVINTNVSA LRAQNNSRVA SQMQSQAMER LSSGKRINAA KDDAAGLAIA TRMDATARGL 
TQAIRNANDG ISLAQTADSA AGSISDILVR MRELAVQSAN GTNGTTDRAA LQTEVTALIS
QIGDIATRTE FNGNVLLDGS AATGFDIQTG INSGDVVNIT IADMQATALG VGTLDISTAA
GASGALATLD TAIQTVATQR ANLGAQQNRL TSAVDNLTST VTNLAESKSR IEDADFSVES
TNLAAAGILA QASTAMLAQA NQSTQGVMNL LR