| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2936 |
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| Symbol | |
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| ID | 4080978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3080339 |
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| End bp | 3081994 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638011321 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_617974 |
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| Protein GI | 103488413 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG CGCAAACCCT GACCCCCGTC GATACCAGCG GCGCGAACCG CTTGCCCGCC
CCCGTCCTCG GCGGCCGCCT CGCGCCGCTC ACCCAGTTCG TCCGCCAGCC CGCGGTGCAG
CGCGCGCTGC CGGCGATCGC GATGACGGCG GCGATCGGCA TCGCCGCGCT CGCTTATTTC
ACGATGCAGA CGGCGCCACA GGCGCAACTC TTCGCCGGGC TCGACGACGC CGACAAGGCG
GCGGTCGCCG AGGCTTTGCA GGCGCAGGGC ATCGGCCACA GCATCGATGG CACGACCGGC
GCGCTCACCG TCGATGCCGA CAAGCTGCAT CAGGCGCGCA TCGCGCTCGC CGGACAGGGC
CTGCCCAAGG CGGCGCCGAG CGGCGACAGC CTGATCGCCG CGCTGCCCAT GGGGTCGAGC
CGCGCGATCG AGGGCGAAGC ATTGCGTTCG GCGCGCGAAG CCGACCTGTC GCGCACGATC
GAAACGATCG ACGCGGTCAA GAGCGCACGC GTCCATATCG CCGCGGCCGA ACCCAGCCTG
TTCGTGCGCG ACGACAAGCC CGCGACCGCA TCGGTGATGC TGACGCTGCA GAACGGTCGC
GCGCTCGGCG ACGGACAGGT GCAGGCGATC CGTTTCCTCG TGGCCTCGTC GGTGCCCGGC
ATGAACGCCG ATCAGGTGTC GGTGATCGAC CAGCGCGGCG CGCTGCTGTC CGACACCGCG
AGCGGCAGCG ACATGAAGGC GTTCCAGTTG CAGTTGCAGG TCGAGGACCG TTTCCGCCGC
GCGCTCGACA CGCTGCTCGG CCCGATGCTC GGCGCGGGCA ATTATACGGT CGAGGTTCAT
GCCGACGTCG ATATGTCCGA AAGCCAGGCG ACGCGCGAAA GCTTCCCCGA AAACGACCGC
GCGCTGACCA GCGAACAGAT CACCCGTTCG GTCAGCGGCA CGGCCAACGC TCCGGCGGTC
GGAATCCCCG GCGCGCTCGC CAACCAGCCC CCGCAGGCGA CGACCATCAC CGCCGAGGGG
CCGCAGCCCG CACCGGCCAA TGCGCCCCTC CCCGGCACCG AAAGCAACGA GAATGCCGCG
CGCGCTTACG AGGTCGGGCG CGAGATTTCG GTGACGCACT CACCGCAGGG CAAGCTGCGC
CGCGTTTCGG TCGCGGTCGC GCTCAATCAG GGCAAGAAGG CGCTGACGCA GGCCGACCTC
GCCAAGATCG ACGCGCTCGT CAAAGGCGCG ATCGGTTACG ACGCCGCGCG CGGCGATATG
GTCGCGATCA ACCAGCGTCC CTTCGCGCCG GTCGAGGATA CGGCCCCCGC CTTCTACGAT
CAGGGCTGGT TCCTGCCGCT GGTCAAACAG GTCGGCGCGA TCCTGGCGGC GCTGCTTGCC
TTCCTGTTCA TCGGCCGCCC GATGATCCGC GCCGCCAGGC AGCGCGCCGC CGCGCGCCTC
GAACAGAATC AGGCGCTGGA GGAAACGCTG CTCGCCGCAA CCGATCGCCC CGCGCTCGCC
AGCGGCGCGA ACAGCCGCGA AATCACGCTC GAAATGATCG AGGCGGCCCC AAGCTATGAA
GCGCGCGCCA ATCTCGTGCG CGCCTTTGTC CGCCAGGATT CGGCACGCGC CGCGCTCGTC
GTGCGCCACC TGATGCAGGA GGGCGCCCGT GCCTGA
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| Protein sequence | MADAQTLTPV DTSGANRLPA PVLGGRLAPL TQFVRQPAVQ RALPAIAMTA AIGIAALAYF
TMQTAPQAQL FAGLDDADKA AVAEALQAQG IGHSIDGTTG ALTVDADKLH QARIALAGQG
LPKAAPSGDS LIAALPMGSS RAIEGEALRS AREADLSRTI ETIDAVKSAR VHIAAAEPSL
FVRDDKPATA SVMLTLQNGR ALGDGQVQAI RFLVASSVPG MNADQVSVID QRGALLSDTA
SGSDMKAFQL QLQVEDRFRR ALDTLLGPML GAGNYTVEVH ADVDMSESQA TRESFPENDR
ALTSEQITRS VSGTANAPAV GIPGALANQP PQATTITAEG PQPAPANAPL PGTESNENAA
RAYEVGREIS VTHSPQGKLR RVSVAVALNQ GKKALTQADL AKIDALVKGA IGYDAARGDM
VAINQRPFAP VEDTAPAFYD QGWFLPLVKQ VGAILAALLA FLFIGRPMIR AARQRAAARL
EQNQALEETL LAATDRPALA SGANSREITL EMIEAAPSYE ARANLVRAFV RQDSARAALV
VRHLMQEGAR A
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