| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2926 |
|---|
| Symbol | fliP |
|---|
| ID | 4081121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3072781 |
|---|
| End bp | 3073551 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638011311 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_617964 |
|---|
| Protein GI | 103488403 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.801028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTG ACGGCCGCTT CTGGCTGCGC GCCGCGGCGC TGACTGGCGG GGCAGGGCTG
CTTTGCGCCG CGACGCCGGC GTTCGCGCAG GCCGCCGACG GGCTCAGCCG CGCGGTGAAC
GAGATCGGCG GCGACGGACG GCCGCTGAGC CTGTCGCTCC AGATCCTCGT CCTGATGAGC
CTCTTGACGG TGCTGCCGTC GCTGCTGCTC ATGATGACCA GCTTCACGCG CATCATCATC
GTGCTGTCGA TCCTGCGCCA CGCGCTCGGG CTGCAACAGA CGCCGCCCAA CCAGGTGCTC
GTGGGTCTCA GCCTCTTTCT CTCGCTCTTC GTGATGCAGC CCGTCATCAG CGAAGTGAAC
CGCGTCGCGA TCGAACCTTA TGGCCAGGAA CAGATCGACA TCGGCGAGGC GGTGTCGCGT
TCGGGCGACG CGCTCCACGG CTTCATGATG AAACAGACGC GCAAGACCGA CCTGATGATG
TTCGCGAAGA TCGCCAGGGC GCCGGCCTAT GCCAGCCCCA AGGACGTGCC CTTTTCGATC
CTGCTTCCCG CCTTTGTCAC CAGCGAGCTC AAGACCGCCT TCCAGATCGG CTTCCTCATC
TTCCTGCCCT TTCTCGTCAT CGACCTGATC GTCGCCTCGG CGCTGATGTC CTTGGGTATG
ATGATGCTGT CGCCGACGAT CATCTCGATG CCCTTCAAGC TGCTGCTTTT CGTTCTCGTC
GACGGCTGGG CGCTGACGAT GGGTTCGCTC GCCGCCTCCT TCGGAACATA G
|
|---|
| Protein sequence | MSIDGRFWLR AAALTGGAGL LCAATPAFAQ AADGLSRAVN EIGGDGRPLS LSLQILVLMS
LLTVLPSLLL MMTSFTRIII VLSILRHALG LQQTPPNQVL VGLSLFLSLF VMQPVISEVN
RVAIEPYGQE QIDIGEAVSR SGDALHGFMM KQTRKTDLMM FAKIARAPAY ASPKDVPFSI
LLPAFVTSEL KTAFQIGFLI FLPFLVIDLI VASALMSLGM MMLSPTIISM PFKLLLFVLV
DGWALTMGSL AASFGT
|
|---|
| |