| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2924 |
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| Symbol | |
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| ID | 4081119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3071715 |
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| End bp | 3072494 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638011309 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_617962 |
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| Protein GI | 103488401 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCG CCGACATCCC CAATGTCGAG GCGATGCTCC AGCTGTGGAT GCTGGGGATG
ATCCGCCCCG GCGCCGCCTT CATCGCCGCA CCCGTGTTCG GCGCCGCCAA TGTGCCGGTG
CAGCTCAGGC TTGTCATCGC GCTTGCGGTC GGCGTGCCCG CGGTCGCGGC GTCGGGCATG
GTGCTGCCCG CCGAAGGGAT CGTGTCGGTG CCGGGCATCT TCTTCATCGT CGGCGAGGTG
GTGATCGGTC TCGCGATCGG CTTCGTGCTC CAGATGGGGC TCGCCGCCGC GCTGCTCGCG
GGCGAAGTCA TCAGCAATGC GATGGGCCTC GGCTTCGCGT CGATGGTCGA TCCCTTGAGC
GGCGCGTCGA GTTCGGCGAT CGGCCAGTTC CTCGCGATGC TCGCGACCGC GCTCTTTCTC
GCCGCCGACG GCCACCTCCT CCTCATCGAC ATCGTCGTGG ACAGCTACAC CGCCCTCCCC
CCCGGCAACG CCTTTCCGTC GTGGGACGCG CTCGGCGGCG TCATCCGCTT CGGCAGCCTG
ATGTTCGCCG CCGCGCTGAC GATCGCGCTG CCCGTCGGTT TCGTGCTGAT CCTCGTCCAG
ATCATCATGG GCGTGATCGG CCGCTCGGCG CCCGCGCTCA ACCTGTTCGC GGTCGGCATC
CCCGCGACGC TGCTCGCCGG CATCGTCCTG CTGGGCGTCG CGACGCCCGC GATGGCCGAA
GCGATCATCC GCATCCTGTC CGACGCGCTC GACGCCGCGC GCATGGTCGC AGGCGTCTGA
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| Protein sequence | MNPADIPNVE AMLQLWMLGM IRPGAAFIAA PVFGAANVPV QLRLVIALAV GVPAVAASGM
VLPAEGIVSV PGIFFIVGEV VIGLAIGFVL QMGLAAALLA GEVISNAMGL GFASMVDPLS
GASSSAIGQF LAMLATALFL AADGHLLLID IVVDSYTALP PGNAFPSWDA LGGVIRFGSL
MFAAALTIAL PVGFVLILVQ IIMGVIGRSA PALNLFAVGI PATLLAGIVL LGVATPAMAE
AIIRILSDAL DAARMVAGV
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