Gene Sala_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2922 
Symbol 
ID4081117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3069156 
End bp3070526 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content65% 
IMG OID638011307 
Productflagellar hook-associated 2-like protein 
Protein accessionYP_617960 
Protein GI103488399 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATT CCATCGCCAA CAGCCTGGGT TTCGGGTCGG GCATCGACAT TCCCAAGCTC 
GTCGACGACC TGTCCAATGC CTCGCGTCAG CCCAAGATCG CGCGCCTCAC CGAATTGACG
CAGGCGAACC AGACGCGGAT CAGCGCGGTG GCCAAGGCGC GCGCCGACCT CGATGGATTC
GCCGATTCGC TGAGCCAGAT GATCGGCGAC GGGACGCTGC GCAGCACGCC CACCGTATCC
GACGACAGCG TGCTTGGCGC GACCAGCCGC GCGGGCCTGT CCGCCGACAG CTTTGCCGCG
ACTGTCGTAG TCAATCAGCT TGCGCGCGCG CAGACCAATT TTTCGGGCGT CGTCGCCGAT
CGCACCGCCG CAATCGGCAC CGGCACGATG ACGCTGACCG TCGGTGGCGT CGCGAAAACG
ATCACGATCG ACGGGACCAA CAACAATCTT GACGGACTGG CCGATGCCAT CAATGCGAGC
GCGGCGGGCG TCACCGCCTC CATCATCGCC GACGAGGGCG GGCACCGCCT CATCCTCAAA
GGCCCGACGG GCGAAGCCAA TGGCTTTACG CTCGTCGCCG ATGCCGGTGC CGACCCGGGG
CTCGCCTCCT TTGCCACCGA CGGCGGCATG ACGCTCGGCC AGAGCGCCGC CGACGCCGAG
TTCACGATCG ACGGCATCGC CTTCAACCGC GCGACCAACA TCGTCGATGA CGTCGTGCCC
GGCATGTCGC TGACCCTGAA AAAGGCGGCG CCCGGCCAGC CCGTCGACAT CGGCGCCAAC
CGCCCGCTCG ACATGATCAA GCAGACGGTG GGCGACTTCG TCGCGGTCTA TAACCAGCTC
AAGGCCAGCC TCACCGCCGC TTCGAACCTT CCCGGCGCGA CGACTTCGCT CCGCGAACTC
GAACGCGACC TCGGCGGCCT GATCCACCAG GTGATTTCGA GCCACGGCAG CATCAACCAG
CTTTCGGACA TCGGCATTTC GGTGACCAAG GAAGGGTTGC TGTCGGTCGA CAATGCGCGG
CTCGACAAGG CACTCGAAAC CGATGCCGGT GCCGTCGAGG CCCTGTTCAA CCCGCGCCGC
GACGCGACGC ACAACGAAAC GACCGATCCC GGCATCGCCT TTGCGCTCGA CGCGATCCGC
GACAGGGCGG TTGGCGCCAA TGGCGCGATC GACCGCGTGT CGCGCTCGCT CGAAACCAGG
CAGAGGACTC TCGCCGAACA GCTTGCGAAG GTCGAGGAGC GCGAAGACGC CTACCGCACG
CGGCTGGAGA AACAATATGG CGCGCTCGAA GCCAGGCTCG CGGCGTTCAA GGCCACGCAG
ACCTATCTCG AACAGCAGAT CAAGCTCTGG ACCAACCAGG GCAACGATTA A
 
Protein sequence
MVNSIANSLG FGSGIDIPKL VDDLSNASRQ PKIARLTELT QANQTRISAV AKARADLDGF 
ADSLSQMIGD GTLRSTPTVS DDSVLGATSR AGLSADSFAA TVVVNQLARA QTNFSGVVAD
RTAAIGTGTM TLTVGGVAKT ITIDGTNNNL DGLADAINAS AAGVTASIIA DEGGHRLILK
GPTGEANGFT LVADAGADPG LASFATDGGM TLGQSAADAE FTIDGIAFNR ATNIVDDVVP
GMSLTLKKAA PGQPVDIGAN RPLDMIKQTV GDFVAVYNQL KASLTAASNL PGATTSLREL
ERDLGGLIHQ VISSHGSINQ LSDIGISVTK EGLLSVDNAR LDKALETDAG AVEALFNPRR
DATHNETTDP GIAFALDAIR DRAVGANGAI DRVSRSLETR QRTLAEQLAK VEEREDAYRT
RLEKQYGALE ARLAAFKATQ TYLEQQIKLW TNQGND