| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2920 |
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| Symbol | |
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| ID | 4081115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 3067483 |
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| End bp | 3068550 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011305 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_617958 |
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| Protein GI | 103488397 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGG GGCACAATAA TCAGCCGACG CTCGAAGCAT TGATCATCGG GACCAGCGAA
GGCGCGGTCC GGCTGCGCGA CATGATCCGC CGGGTGGCGC GGTCGAACGC CTCGGTGATG
CTCTGCGGCC CCTCGGGATC GGGCAAGGAA CTGGTGGCCC GCGCGATCCA CGACGAAGGC
ACCCGTGCGG GCAAGGCTTT TTCGGCGATC AACTGTGGCG CGATCCCCGG CGAACTCATT
GAATCCGAAC TTTTCGGGCA TGAAAAGGGC AGCTTCACCG GCGCCCACGC CCGCCGCATC
GGCCATTTCG AGGCCAGCGA AGGCGGCACC ATCTTCCTCG ACGAAATCGG CGACATGCGC
TTCGACATGC AGGTCAAGCT GCTCCGGGTG CTCGAAGACC GTACGATCGT GCGCGTCGGA
TCGAGCGAGG TGAAGCCGGT CGACGTGCGG GTCATTTCGG CGACCCACCA GGATCTCGGC
GCCGCAATCG CCGAAGGCAA GTTCCGCGAA GACCTGTTCT TCCGGCTCGG CGTGGTTGTG
CTCCAGGTCC CCAGCCTGGC GAGCCGCGCC GAGGATATTC CCGCGCTCAT CCGCCATTTC
CAGCGCAAGA TGCCGGTCGA TGCCAAATGC CGCTTCGACG CCGGCGCCAT GGCGATGCTG
ATGCAGCATC GCTGGCCCGG CAATGTGCGC GAACTCAGAA ACTTCGTCGA GCGCGCCAGC
GTCCTCCACG GGGGCGAGAC GCTCGACGCG CAGGACGTGG CGATGCTCCT GAACCCCACC
GCGACGCCTG CTCCGCGGCC CGCTGTCCCC GGCGGCATCG CCGCGGTGCA GGCCAGCGCG
GACGATCGCC CTGTGCCGCA GCCCGCGGCG GCGGTTGCCA AGACGCCAGC GCCGGGCCGC
CCGATTGACC TCAAGCGCGA GATCGAGACG ATCGAACTCG AACAGATCCA CGTCGCGCTC
GATCTCGCCG ACGGCATCAT TTCGGAAGCC GCGCGCCTCC TGACGCTGAA GCGCACAACG
CTGATCGAAA AGATGCGCAA ATATGGGGTT CACCAGCAGG CCGCCTGA
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| Protein sequence | MTVGHNNQPT LEALIIGTSE GAVRLRDMIR RVARSNASVM LCGPSGSGKE LVARAIHDEG
TRAGKAFSAI NCGAIPGELI ESELFGHEKG SFTGAHARRI GHFEASEGGT IFLDEIGDMR
FDMQVKLLRV LEDRTIVRVG SSEVKPVDVR VISATHQDLG AAIAEGKFRE DLFFRLGVVV
LQVPSLASRA EDIPALIRHF QRKMPVDAKC RFDAGAMAML MQHRWPGNVR ELRNFVERAS
VLHGGETLDA QDVAMLLNPT ATPAPRPAVP GGIAAVQASA DDRPVPQPAA AVAKTPAPGR
PIDLKREIET IELEQIHVAL DLADGIISEA ARLLTLKRTT LIEKMRKYGV HQQAA
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