Gene Sala_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2918 
Symbol 
ID4081113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3065576 
End bp3066439 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID638011303 
Productflagellar motor protein MotA 
Protein accessionYP_617956 
Protein GI103488395 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCCG TTGTCGGCAT TGTCGTTCTG ATCCTGCTGG TTTTCGGGGG TTTTGCGCTG 
ACCGGTGGCA ATCTCGGCCC TGTCATGCAC GCGCTGCCGC ACGAAATGCT CATCATCGGC
GGTGCGGCGC TCGGCTCGCT CATCATCGGC AATTCGGGTG CCGATCTGAA GGCGCTCGCG
GGCGGGCTCG GCAAGGTGTT CAAGGGACCG CAGTATAAAA AACAGGATTA TCTCGACTGC
ATCCTGCTCG TCTCGTCGCT GATGAAAATG ATGCGCACCG AAGGGCCGGT GGCGGTCGAA
CCGCATATCG AGGATCCGAA GAACTCGACG ATTTTCCAGC AATATCCCAA GCTGTTGAAG
GACGATACGC TCGTCCACCT GATCTGCGAC ACGCTGCGCC TCGTCGTCGT CTCCTCGGGC
ACGCTCGACC CCCACGCGGT CGAGGAGGTC ATGGACAATG CCCTGAAATC GCACCACCAC
CACAGCATGA AGCCCGCCGA TGGCTTGCAG AGCCTCGCCG ATGCGCTCCC GGCGCTCGGC
ATTGTCGCCG CGGTGCTGGG CGTCGTGAAG ACGATGGGCT CGATCGACAA GCCGCCCGAG
ATTCTCGGCG CGATGATCGG TTCGGCGCTC GTCGGAACCT TCCTCGGCGT GCTGCTCGCC
TATGGACTCG TAGGGCCTTT CGCGACGCGC GCCAGGACCG TGATCGAAAG CGACGGCGCC
ATCTATCATA CGGTGAAGCA GCTCATCATC GCTTCGCTCC ACGGCCACCC GCAGCCGCTG
GTGATCGAGG CGGCGCGATC GGGGGTCGAT CATCATAACC AGCCGAGCTT CGCCGAGGTC
TTCGACGGGA TGCGGGGCCG CTGA
 
Protein sequence
MFPVVGIVVL ILLVFGGFAL TGGNLGPVMH ALPHEMLIIG GAALGSLIIG NSGADLKALA 
GGLGKVFKGP QYKKQDYLDC ILLVSSLMKM MRTEGPVAVE PHIEDPKNST IFQQYPKLLK
DDTLVHLICD TLRLVVVSSG TLDPHAVEEV MDNALKSHHH HSMKPADGLQ SLADALPALG
IVAAVLGVVK TMGSIDKPPE ILGAMIGSAL VGTFLGVLLA YGLVGPFATR ARTVIESDGA
IYHTVKQLII ASLHGHPQPL VIEAARSGVD HHNQPSFAEV FDGMRGR