Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2917 |
Symbol | |
ID | 4081112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3064644 |
End bp | 3065474 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638011302 |
Product | flagellin-like protein |
Protein accession | YP_617955 |
Protein GI | 103488394 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCAACG CCGTAGGCAA TCGCATGACG CGCGAAATCG CGCGCCAGCA AAGCCTCGCC GAACAGCTCG AGCGGACGCA GATCCAGATT TCGGGCGGCA AGAAACTGCT GCGCATGTCC GACGATCCGG TCGCCGCGCG GCGGATCGCG ACGATCGGCA CGACGCAGGC GAGCATGACC GCCTGGTCGG CGAACGTCAA TTCGGCCGCC GCGCTCGTGT CGCAGGCCGA TGGCGTCATG AAGGCGGTCA GCAATCTGAT GACACGCGCG CGTGAACTGA CGCTCGCCGC GGTCAGCGAT TCGACGAACC CGGCGGATCG TGCAACGATC GCTGCCGAAC TCACCACGAT TGCCGATGAA CTCGATGCGC TCGCCGCGAC GCGCGATTCG AATGGCGAGC CGCTGTTTGC GGCGGGTCCC GCGCGCGTGA TGCGGTTCGA CGCGGACCTC AGCTTTGCAC CGGTGCCTTC GGCCGCCGAT ATATTCGTCA TCGCCGGCAA CAGCCTGTCG ACGGGCATCC GCGACGCGGC AACCGCGGTT GCCGCGGGTG ACACCGCCGC GATGAACCTG TCGCTCGGCG CGCTGGCGGC CTCGATCAGC CATGTCGCTG ACCAGCATGC CCGGATCGGC CTGGCGGGCG GGCGCCTCGA CCGCATCGGC GACGGGCTCG CGGCGCGCGG GATCGCGCTG ACCGACGAAC GCTCGGTGGT CGAGGACACC GACCTCACCG TCGCGATCGC GCAGCTCAAT GCGCAGGAAC TGACGCTCAA CGCCGCGCAG GCGGCCTTTG CCAAGATCAA CCGGCAGACC TTGTTCGATC TTTTGCGCTG A
|
Protein sequence | MINAVGNRMT REIARQQSLA EQLERTQIQI SGGKKLLRMS DDPVAARRIA TIGTTQASMT AWSANVNSAA ALVSQADGVM KAVSNLMTRA RELTLAAVSD STNPADRATI AAELTTIADE LDALAATRDS NGEPLFAAGP ARVMRFDADL SFAPVPSAAD IFVIAGNSLS TGIRDAATAV AAGDTAAMNL SLGALAASIS HVADQHARIG LAGGRLDRIG DGLAARGIAL TDERSVVEDT DLTVAIAQLN AQELTLNAAQ AAFAKINRQT LFDLLR
|
| |