Gene Sala_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2917 
Symbol 
ID4081112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3064644 
End bp3065474 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content67% 
IMG OID638011302 
Productflagellin-like protein 
Protein accessionYP_617955 
Protein GI103488394 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG CCGTAGGCAA TCGCATGACG CGCGAAATCG CGCGCCAGCA AAGCCTCGCC 
GAACAGCTCG AGCGGACGCA GATCCAGATT TCGGGCGGCA AGAAACTGCT GCGCATGTCC
GACGATCCGG TCGCCGCGCG GCGGATCGCG ACGATCGGCA CGACGCAGGC GAGCATGACC
GCCTGGTCGG CGAACGTCAA TTCGGCCGCC GCGCTCGTGT CGCAGGCCGA TGGCGTCATG
AAGGCGGTCA GCAATCTGAT GACACGCGCG CGTGAACTGA CGCTCGCCGC GGTCAGCGAT
TCGACGAACC CGGCGGATCG TGCAACGATC GCTGCCGAAC TCACCACGAT TGCCGATGAA
CTCGATGCGC TCGCCGCGAC GCGCGATTCG AATGGCGAGC CGCTGTTTGC GGCGGGTCCC
GCGCGCGTGA TGCGGTTCGA CGCGGACCTC AGCTTTGCAC CGGTGCCTTC GGCCGCCGAT
ATATTCGTCA TCGCCGGCAA CAGCCTGTCG ACGGGCATCC GCGACGCGGC AACCGCGGTT
GCCGCGGGTG ACACCGCCGC GATGAACCTG TCGCTCGGCG CGCTGGCGGC CTCGATCAGC
CATGTCGCTG ACCAGCATGC CCGGATCGGC CTGGCGGGCG GGCGCCTCGA CCGCATCGGC
GACGGGCTCG CGGCGCGCGG GATCGCGCTG ACCGACGAAC GCTCGGTGGT CGAGGACACC
GACCTCACCG TCGCGATCGC GCAGCTCAAT GCGCAGGAAC TGACGCTCAA CGCCGCGCAG
GCGGCCTTTG CCAAGATCAA CCGGCAGACC TTGTTCGATC TTTTGCGCTG A
 
Protein sequence
MINAVGNRMT REIARQQSLA EQLERTQIQI SGGKKLLRMS DDPVAARRIA TIGTTQASMT 
AWSANVNSAA ALVSQADGVM KAVSNLMTRA RELTLAAVSD STNPADRATI AAELTTIADE
LDALAATRDS NGEPLFAAGP ARVMRFDADL SFAPVPSAAD IFVIAGNSLS TGIRDAATAV
AAGDTAAMNL SLGALAASIS HVADQHARIG LAGGRLDRIG DGLAARGIAL TDERSVVEDT
DLTVAIAQLN AQELTLNAAQ AAFAKINRQT LFDLLR