| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2914 |
|---|
| Symbol | flgI |
|---|
| ID | 4081109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3061877 |
|---|
| End bp | 3062992 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638011299 |
|---|
| Product | flagellar basal body P-ring protein |
|---|
| Protein accession | YP_617952 |
|---|
| Protein GI | 103488391 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1706] Flagellar basal-body P-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.193418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTGA TCCAGCGTCC GATCCTGTTC GCGCTTTTCG CGCTCCTGTT CATGGGCCTC
GCCTTCTCGG CGCCCGCGCA CGCCGAGCGC ATCAAGGACA TGGGCCAGTT CCAGGGCCTG
CGCGCCAACC AGCTCACGGG GTACGGCATC GTCGTCGGGC TCGCGGGCAC CGGCGACGAC
AGCCTCGACT ATTCGACGCT GGGCATGAAG GGCGCGGTGT CGCGCTTTGG CCTGACCCTG
CCGCCGGGGG TGAACCCGGC GCTCAAAAAT GCCGCGGCGG TGATGATCAC CGCCGAACTG
CCGCCCTTTG CCAAGCCCGG CCAGCGACTC GACATCACTG TCTCGGCGAT CGGCAAGGCG
AAATCCTTGC GCGGCGGCAC GCTCGTGCTC GCGCCGCTCT ATGGCGCCGA TGGACAGATT
TACGCGATGG CGCAGGGCAA TCTGGTGATC GGCGGGCTCG GCGTCGATGC CGCCGACGGA
TCGAAGCTGA CGGTCAATGT GCCGTCGAGC GGCCGGATCG CGGCGGGCGC GACGGTCGAA
CGCGCGGTCG ACACCGGCTT TGCGACGAGC GACTGGCTGA CCTTCAACCT CCACCAGTTC
GACGCGACCA ATGCGAAGCG CGTCACCGAC GCGATCAACG CCGCCATTCC GGGCAGCGCT
TCGATGATCG ACGGCGCCAG CATCGCCATC CGCACCGCGG GCAATGGCGA CGAGCGGATG
CGGCTGATGT CGCGGATCGA GAATCTGACC GTCACGCGCG CCGAGCCGCC CGCAAAGGTC
ATCGTCAACG CACGCACCGG CACCGTGGTG ATCAACGGCG CGGTCCGCGT CGGCACTGCG
GCGGTCAGCC ATGGCAAGCT CACCGTGTCG GTCAAGGAAT CGCCGATGGT CGTCCAGCCC
GCGCCGTTCA GCCGCGGCGA GACCGCGATC GAACCGTCGA GCGAAATCGA AGTGGCGGAG
GATTATCGCC CCGCCTTCCT GATCGAACCC AACGCCTCGC TCTCCCAATT GGTCGATTCG
ATCAACCGGC TGGGCGTTCC CCCCGGCGAC CTTGTCGCCA TCCTCGAGGC GCTGAGCCAG
GCCGGCGCAC TCACTGCGGA ACTGGTGATC ATATGA
|
|---|
| Protein sequence | MHVIQRPILF ALFALLFMGL AFSAPAHAER IKDMGQFQGL RANQLTGYGI VVGLAGTGDD
SLDYSTLGMK GAVSRFGLTL PPGVNPALKN AAAVMITAEL PPFAKPGQRL DITVSAIGKA
KSLRGGTLVL APLYGADGQI YAMAQGNLVI GGLGVDAADG SKLTVNVPSS GRIAAGATVE
RAVDTGFATS DWLTFNLHQF DATNAKRVTD AINAAIPGSA SMIDGASIAI RTAGNGDERM
RLMSRIENLT VTRAEPPAKV IVNARTGTVV INGAVRVGTA AVSHGKLTVS VKESPMVVQP
APFSRGETAI EPSSEIEVAE DYRPAFLIEP NASLSQLVDS INRLGVPPGD LVAILEALSQ
AGALTAELVI I
|
|---|
| |