Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2908 |
Symbol | |
ID | 4080932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3057712 |
End bp | 3058515 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638011293 |
Product | flagellar basal-body rod protein FlgC |
Protein accession | YP_617946 |
Protein GI | 103488385 |
COG category | [N] Cell motility |
COG ID | [COG1558] Flagellar basal body rod protein |
TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.742895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGC CAGTCGGCCG GACCGCGGCA AGCGTAAGGC AAGCGAAGGA ATGTGGTGAT GGCATCCGAG AAACTCTTTG GCCTGCACGC GACGGCGCTC CAGTTGCGCA GCCAGCGCAT GATGATGCTC GCGTCGAACA TCGCGAACGC CGCGACGCCC GGTTACAAGG CGCGCGACCT CGACTTCGCC AAGGCGCTCG ACCTCGCGCA GCAGGGTCGG TCGACGGAGC AGGCGATTGC CTATCGCGTG CCGGTGCAGG CTTCGCTCGA CGGCAACACC GTCGAAATGG CGACCGAGCA GACCGCCTAT GCCGAAAATG CGCTCGCCTA TCGGTCGAGC CTCGCCTTTC TGAGCGGCCG CATCAACACG CTGTCGCGCG CGCTGAAAGG CGAATAACGA TGAACGGCAG CTTTTCCGTC TTCGACATCA GCGGCCGCGC CATGTCGGCA CAGCTGGTGC GGCTCAACAC CACCGCGTCG AACCTCGCCA ATGCGGGGAC GGTCGCGGGC AGCGAGGCGG GCGCCTTCCG CTCGCTCAAG CCCGTCTTTC GCACGGTGAT GGACGATCAT GGCCGCGCGA CGGTGCAGAT CGACCAGATC ACGACCTCGA AAATGGCGCC GTCGAAGCGC CACGATCCGT CGAACCCGCT CGCCGACGCC GACGGCAATG TCTGGGAAGC CGCGGTCGAT AGCGCCGCCG AACTGGTCGA GATGGTCGAA ACCGCGCGCC AGTATCAGAA CAATGTCCAG GTCCTCGAAA CCGCGAAAGG CCTGATCAAC GAAACCCTGA GGATGGGACA GTAA
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Protein sequence | MSAPVGRTAA SVRQAKECGD GIRETLWPAR DGAPVAQPAH DDARVEHRER RDARLQGARP RLRQGARPRA AGSVDGAGDC LSRAGAGFAR RQHRRNGDRA DRLCRKCARL SVEPRLSERP HQHAVARAER RITMNGSFSV FDISGRAMSA QLVRLNTTAS NLANAGTVAG SEAGAFRSLK PVFRTVMDDH GRATVQIDQI TTSKMAPSKR HDPSNPLADA DGNVWEAAVD SAAELVEMVE TARQYQNNVQ VLETAKGLIN ETLRMGQ
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