| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2907 |
|---|
| Symbol | |
|---|
| ID | 4080931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 3056974 |
|---|
| End bp | 3057486 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638011292 |
|---|
| Product | flagellar protein |
|---|
| Protein accession | YP_617945 |
|---|
| Protein GI | 103488384 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCCCGCA GTATCTTTGC AACGCTCGCC GCCTGCGCCA TCGCCGCGCC GATCGCGGCG
CAAGGCCAGA CCGCCACCGA GGATTGGCAG GCGATCGACG CGCTGACCGC GACGGTCGCC
AGCGCGCTCG GCCGTACCGC GGTGCCGATC GATCGCCGCA TCAAGCTGGC GCGCTGCCCC
GAGCCCGCGA CGGTGACCGC GATCGATGCC AACACGCTCG CGGTGCGCTG CGCCCCGCTC
GGATGGCGGC TGCGCGTCGC GATGACGGCG GGCGCGGACG GCGCGTTGCC GGTCGCGGCT
CCCTTCGCGC GCGCCGCGCC GAGCGCGCCC GTCGTTCGCC GCGGCGACCA TGTCCGCGTG
TCGATCGACA CGCCGAACTA TTCGATCAGC TATGCCGCGA TCGCCGTCGA GGACGGCCGC
GTCGGCGACT CGATCGCGCT GCGCGGCAGC GACCGCAAAT CGACGCTGAG CGCCACCGTC
ACCGGCCCCG GCGCCGCGCG CATCGATCCC TGA
|
|---|
| Protein sequence | MSRSIFATLA ACAIAAPIAA QGQTATEDWQ AIDALTATVA SALGRTAVPI DRRIKLARCP
EPATVTAIDA NTLAVRCAPL GWRLRVAMTA GADGALPVAA PFARAAPSAP VVRRGDHVRV
SIDTPNYSIS YAAIAVEDGR VGDSIALRGS DRKSTLSATV TGPGAARIDP
|
|---|
| |