Gene Sala_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2894 
Symbol 
ID4080687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3044761 
End bp3045816 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID638011278 
Producthypothetical protein 
Protein accessionYP_617932 
Protein GI103488371 
COG category[S] Function unknown 
COG ID[COG2855] Predicted membrane protein 
TIGRFAM ID[TIGR00698] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.380693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACGT CCGGACAACA TTGGCCGATG GCCGCCGACC TGTACGGCGA GATGCAGCTC 
GAGGCGAACC CGCCGGCGCG GCGCCGCTGG CACGATTATC TGCCCGGCAT TCTCGTCACC
GCAATCGCCG CGCTCGCCGC GGCTTGGCTC GCCGATCATT ATGCCGCGCC GATCGTGCTG
ATGGGCTTGC TCATCGGCCT CGCGCTCTCC TTCCTGTCGC AGGACGTGCG GACGCACGCC
GGGCTCGATC TCATGTCGCA GACCGCGCTG CGCATCGGCA TCGTGCTCGT CGGGGCGCGG
ATCACCGCCG TCCAGCTTGC CGAAATGGGG CCGCTGCCGT TCCTGCTGCT CGTCGCCATC
ATGCTCGCGG TGATCCTTGT GACCGTCGCG AGCGCACATC TTTTTGCGCA GGACCGCCAC
GCCGCACTGC TCGCGGGTGG CGCGACGGCA ATCTGCGGCG CATCGGCGGC GCTCGCGCTC
TGGTCGCTGA TCGGCGACCG GCGCATCGAT CAGGCGCGTT TCACGCTGAC GCTCGTCGGC
ATCACCGTCG CCAGCGCGCT CGCGATGACA CTCTATCCGG TGCTCGCCGC AGAGCTGGGG
TTGACCGACG CGCAGGCCGG ATTCCTGATC GGCGCGTCGA TCCACGACGT CGCGCAGGCG
ATCGGCGGCG GCTTTTCCTT TTCTCCGCAA GCGGGCGAGG TGGCGACGAT CGTCAAGCTG
ACGCGCGTTG CGCTGCTCGC GCCGATGCTG ATGCTCGTCG CACTATGGCT CGGTCGCCGC
GGCGAAGCGG GCGCGCGCAT TCCACTGCGT TTGCCGTGGT TCATTCTGGG GTTCCTGGCC
GTGGTCGCGA TCAATTCGCT CGTGGCGATC CCGCGGCCGG TGCAGGCGGG CGCCGCGACC
GGCGCGCAGG CGCTGTTGCT GCTCGCGATC GTCGCGACCG CGATGAAGGC ACGGCTGCAC
CTGCTGCTCG ATCAGGGGTG GCAGAGCTTT GCGCCGATCA TCGTCGCGAC GCTGACCAGC
TTCCTTTTGT CGCTCGGCGC CGCGCTGCTG TTATGA
 
Protein sequence
MKTSGQHWPM AADLYGEMQL EANPPARRRW HDYLPGILVT AIAALAAAWL ADHYAAPIVL 
MGLLIGLALS FLSQDVRTHA GLDLMSQTAL RIGIVLVGAR ITAVQLAEMG PLPFLLLVAI
MLAVILVTVA SAHLFAQDRH AALLAGGATA ICGASAALAL WSLIGDRRID QARFTLTLVG
ITVASALAMT LYPVLAAELG LTDAQAGFLI GASIHDVAQA IGGGFSFSPQ AGEVATIVKL
TRVALLAPML MLVALWLGRR GEAGARIPLR LPWFILGFLA VVAINSLVAI PRPVQAGAAT
GAQALLLLAI VATAMKARLH LLLDQGWQSF APIIVATLTS FLLSLGAALL L