Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2893 |
Symbol | |
ID | 4080686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3043859 |
End bp | 3044623 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638011277 |
Product | Zinc finger/thioredoxin putative |
Protein accession | YP_617931 |
Protein GI | 103488370 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02098] MJ0042 family finger-like domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCTCG CCTGCCCGTC CTGCCGCACG CGCTATGTCG TTCCGGATAC CGCGATCGGA CCCGCGGGTC GCACCGTACG TTGCGCCAAT TGCCGCCACA GCTGGTTTCA GCAGCCCGCC GCCGCGCCGC CGCCGCCCGA CGCCATCGTC CCACCGGACG TCACCGCCGA AGCGGCTCGC GGACCCGGAC CCGCGCCGAC CCCGGCCCCC GCCCCCACCT ATTCCGATTT TCCCGAACCC GAAGCGGTGC CGCCGCCGCC GGCCTTTGCC GCCGACCCGC CGCCGCGCCC CGCGCCGCCG GCCGAGGACG CGCCGCTGCC GTTCCGCCGC CCGCGCCGCA ATCCGGCAAA GCGCTGGACG ATCATCGCCG CGAGCGCCGC GGCGTTGATG CTTGCGGCGA CGGGCGCGCT CGTCTGGTAC GGGCTGCCAA GCTGGGCCGA GGGGCTGGGC CTGCCCGGCG GCACGGCCGA ACCCGATCTG GTGATCGAAC TGCCGCCCAA CCAGGATCAC CGCGAACTCG CCGACGGCAC CATCTATTTC GCCGCCTCGG GGGTGATCAT CAATCCGACC GACCGCGAAC AGCGCGTGCC GCCGATCCTT GCCGAACTGC GCGATGCGCA GGGCACGATC GTTTACAGCT GGACGATCAA GCCGCCGGTG CGGGTGCTGC CGCCCAATGA AAAGGTCAAT TTCAGCGAGG CAAAGCTCGA CATCCCGCGC CGTGCGACGC AGCTGACGGT CAGCTGGGCG CTACCCAAGA GTTGA
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Protein sequence | MILACPSCRT RYVVPDTAIG PAGRTVRCAN CRHSWFQQPA AAPPPPDAIV PPDVTAEAAR GPGPAPTPAP APTYSDFPEP EAVPPPPAFA ADPPPRPAPP AEDAPLPFRR PRRNPAKRWT IIAASAAALM LAATGALVWY GLPSWAEGLG LPGGTAEPDL VIELPPNQDH RELADGTIYF AASGVIINPT DREQRVPPIL AELRDAQGTI VYSWTIKPPV RVLPPNEKVN FSEAKLDIPR RATQLTVSWA LPKS
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