Gene Sala_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2893 
Symbol 
ID4080686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3043859 
End bp3044623 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID638011277 
ProductZinc finger/thioredoxin putative 
Protein accessionYP_617931 
Protein GI103488370 
COG category 
COG ID 
TIGRFAM ID[TIGR02098] MJ0042 family finger-like domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCG CCTGCCCGTC CTGCCGCACG CGCTATGTCG TTCCGGATAC CGCGATCGGA 
CCCGCGGGTC GCACCGTACG TTGCGCCAAT TGCCGCCACA GCTGGTTTCA GCAGCCCGCC
GCCGCGCCGC CGCCGCCCGA CGCCATCGTC CCACCGGACG TCACCGCCGA AGCGGCTCGC
GGACCCGGAC CCGCGCCGAC CCCGGCCCCC GCCCCCACCT ATTCCGATTT TCCCGAACCC
GAAGCGGTGC CGCCGCCGCC GGCCTTTGCC GCCGACCCGC CGCCGCGCCC CGCGCCGCCG
GCCGAGGACG CGCCGCTGCC GTTCCGCCGC CCGCGCCGCA ATCCGGCAAA GCGCTGGACG
ATCATCGCCG CGAGCGCCGC GGCGTTGATG CTTGCGGCGA CGGGCGCGCT CGTCTGGTAC
GGGCTGCCAA GCTGGGCCGA GGGGCTGGGC CTGCCCGGCG GCACGGCCGA ACCCGATCTG
GTGATCGAAC TGCCGCCCAA CCAGGATCAC CGCGAACTCG CCGACGGCAC CATCTATTTC
GCCGCCTCGG GGGTGATCAT CAATCCGACC GACCGCGAAC AGCGCGTGCC GCCGATCCTT
GCCGAACTGC GCGATGCGCA GGGCACGATC GTTTACAGCT GGACGATCAA GCCGCCGGTG
CGGGTGCTGC CGCCCAATGA AAAGGTCAAT TTCAGCGAGG CAAAGCTCGA CATCCCGCGC
CGTGCGACGC AGCTGACGGT CAGCTGGGCG CTACCCAAGA GTTGA
 
Protein sequence
MILACPSCRT RYVVPDTAIG PAGRTVRCAN CRHSWFQQPA AAPPPPDAIV PPDVTAEAAR 
GPGPAPTPAP APTYSDFPEP EAVPPPPAFA ADPPPRPAPP AEDAPLPFRR PRRNPAKRWT
IIAASAAALM LAATGALVWY GLPSWAEGLG LPGGTAEPDL VIELPPNQDH RELADGTIYF
AASGVIINPT DREQRVPPIL AELRDAQGTI VYSWTIKPPV RVLPPNEKVN FSEAKLDIPR
RATQLTVSWA LPKS