| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2887 |
|---|
| Symbol | |
|---|
| ID | 4080680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 3038668 |
|---|
| End bp | 3039783 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638011271 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_617925 |
|---|
| Protein GI | 103488364 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CGACCCCCAC CCTGACGCCC AAGCCGTGGA TCAGCGGCAT CGCCCCCTAT
GTGCCCGGCA AGTCGGCGGG CGCCGACGGC CGCCCGCTCA TCAAGCTGAG CGCGAACGAA
AATCCGCTCG GCACGGGGGA GAAGGCGCGC GCGGCCTTTG CCGCGGTGCA GTCGGCGCCC
GACGCGCTGT CGCGCTATCC CGATCCGGGG TCGGTCGAAT TGCGCGCGGC GATCGCCGCC
AAATATGGGC TCGACCCCGA CCGGGTGATC TGCGGCAACG GCTCGGACGA ACTGTTGCAC
CTCGCCGCCG GGACCTATGC CGGGCCGGGC GACGAGATTC TTTATGTCCG CTATGGCTTT
GCGGTCTATG AAATCGCCGC GCGGCGCGTC GGCGCAGTGC CGGTCGAGGC CGACGACCGT
GATTTTGCAA CCGATGTCGA TGCGTTGCTC GCCGCGGTGA CCGACAGAAC GCGCGTCGTC
TATCTCGCCA ATCCGAACAA TCCGACGGGG ACGCTCGCGA CGCGCGAAGA AGTTGGGCGG
CTTTACGCCG GGTTGCCCCA AAATGTGCTG TTCGTGATCG ACCAGGCCTA TGCCGAATAT
CTGACGCCGG ACGAAGACGA CGGCGGGCTG GAGCTGGCAA AGACCCGGCC CAATGTCTTT
GTCACGCGCA CCTTCTCCAA AATCCACGGG CTTGCTGCCG AGCGCATCGG TTGGGGTTAT
GCGAGTGCCG ATGTGATTGC GGCGCTGCAC CGCATCCGCC TGCCGTTCAA CGTCACCCGC
GCCGGGCAGG CGGCGGCGGT CGCGGCGCTC GGCGACGATG ATTTCGTGAA CCGCAGCCGC
GCGCATAATG CCCGCTGGCG CGCCTGGCTG GCGGCGGAAC TGGAGAGCCT GGGCAATCAT
GGCGTGCGCG TCGTCCCGTC GGCGACCAAT TTCCTGCTCG TGCTGTTCGA GGGCGCGGTG
AGCGCCGAGA CCGTCTATCA CCGGCTGATG GACGCGGGCT ATATCGTCCG CTGGCTCCCC
GGACAGGGGA TTCCGCAGGC GCTGCGCATG ACGATCGGCA CCGAGGACGA GACGCGCGGG
CTTGCGACGG CAATCCGCGC CGCGCTCGCC GGTTGA
|
|---|
| Protein sequence | MTDATPTLTP KPWISGIAPY VPGKSAGADG RPLIKLSANE NPLGTGEKAR AAFAAVQSAP
DALSRYPDPG SVELRAAIAA KYGLDPDRVI CGNGSDELLH LAAGTYAGPG DEILYVRYGF
AVYEIAARRV GAVPVEADDR DFATDVDALL AAVTDRTRVV YLANPNNPTG TLATREEVGR
LYAGLPQNVL FVIDQAYAEY LTPDEDDGGL ELAKTRPNVF VTRTFSKIHG LAAERIGWGY
ASADVIAALH RIRLPFNVTR AGQAAAVAAL GDDDFVNRSR AHNARWRAWL AAELESLGNH
GVRVVPSATN FLLVLFEGAV SAETVYHRLM DAGYIVRWLP GQGIPQALRM TIGTEDETRG
LATAIRAALA G
|
|---|
| |